EST details — SGN-E543963

Search information 
Request: 543963Match: SGN-E543963
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192606Clone name: TUS-66-A20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93732 [cLEX-15-I9] Trace: SGN-T117880 EST: SGN-E305394 Direction: 5' Facility: TIGR
Clone: SGN-C192606 [TUS-66-A20] Trace: SGN-T344837 EST: SGN-E543962 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E543963Length: 686 bp (871 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543963 [] (trimmed) GATTAAAGATTCATTTGAAGATCCATTGAATTTCTTGAACACTACATGGAAGTTCGATAATCAGACCGAAGGTTTCATCTGCAAGTTTGCTGGGA
TTCAGTGCTGGCATCCTGATGAAACCAGAGTTTTGAGTATCAGTCTTCCTGACATGCGTCTCAAGGGCAAGTTTCCACGTGGTCTTAAGAATTGC
ACCTCTATTACATCATTAGATCTTTCGAGCAACGAGCTCCATGGAAGTATTCCAAATGATATCTCCAAAATTATAGGTTTTGTGGTAATGCTGGA
TCTCTCATCCAACAATTTTTCAGGGGAAATCCCAGTTAATCTTGCAAACTGCTCTTTTTTAAATAGCCTTAGACTTGACGACAACCAGTTTACGG
GCCCAATTCCTGCAGAAATTGGCTTGCTTGGTCGGCTCAAGAATTTTAATGTAGCAAACAATCGATTGACTGGAGCAGTTCCACGTTTCACAAAT
GCAACTTTTCCTGCAGAGATCTATGCCAATAATGCCGGACTGTGTGGACCACCATTAACTCTTTGTGAGGATATTGCTAAGAAACCCCGTACTGG
AATCATTGTTGGTGCAACTGTTGGTGGGGTGACTTTAGGTGCTGTATTATTGACCATTGGTATGTTCTTATGTATGAGAAAGATATCCTGGAAGA
GGAATAATGCAGATGATCCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543963] SGN-U580725 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344838 [Download][View] Facility Assigned ID: TUS66A20_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0108 Quality Trim Threshold: 14.5