EST details — SGN-E543979

Search information 
Request: 543979Match: SGN-E543979
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192616Clone name: TUS-66-B6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93765 [cLEX-15-K4] Trace: SGN-T117756 EST: SGN-E305270 Direction: 5' Facility: TIGR
Clone: SGN-C192616 [TUS-66-B6] Trace: SGN-T344855 EST: SGN-E543980 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E543979Length: 650 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E543979 [] (trimmed) GGGAAAAAGCCAATGAAGGGTACATCACTTATTTGTTTCTTACAATATGAATACTGAAGATAGTTGATATACAAACAGCCATCTGGCCAACTTTG
TGTACACAATAATGAATAAATACAATGACACAATTGTTAAAACAAAAAAAGAAAAGGAAACAACAGTCTCAATCAATAAATTTCACACGATACGA
TTTATCTTCGAAGCTCATTTATCTCCTTGATGAAGCACCATGAATGGCAGCTATGTATACCAGTTGAGTAAATGATAGAATTATCATGAATGCCT
CCATTGTTTTCAATTTGGAATTCCTGTAGTTGAGTTCAATTTCTTTCCAAGCAAAGCCCATGGCAAGGACTGTAAGACTCCAGGCTATTGTAGCA
GCAGAAGCAGCAGATGGTAAGCTATCGATGTTCCAATGGCGAATGTGGTTAAGTCCAGAGAGAACAGATGCAACTCCAACCACACCTGCTATCAA
AGCAAATACAACAAAGAATCCAGTGGCAGCATTTCCAATTGGGAAGTAAATTGGTGAGAAATGTGCTGGAAGATTCATTCCTGGACCAATGACAA
AACCATTATCAATGGCAAAGTTCATAGCCCAACCACCAATACCTAAAACAACAACATACATGCCGAAATTAAGGACCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543979] SGN-U565295 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344854 [Download][View] Facility Assigned ID: TUS66B06_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0097 Quality Trim Threshold: 12.5