EST details — SGN-E544034
| Search information |
| Request: 544034 | Match: SGN-E544034 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192647 | Clone name: TUS-66-C13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C97171 [cLEY-1-I7] | Trace: SGN-T118433 | EST: SGN-E302750 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C97171 [cLEY-1-I7] | Trace: SGN-T118434 | EST: SGN-E302751 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C192647 [TUS-66-C13] | Trace: SGN-T344908 | EST: SGN-E544033 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544034 | Length: 234 bp (903 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E544034 [] (trimmed)
GCTAGGGGATGCGTAAATCTTGGCAGGTCCGCGGCAAATAATGACTAACACATTAGGAATTTTTTGCCTCATTAGAAATGTGGTTTATACTTCTC
TTAACTCAATTTTGTTGGTTGTAGATCTCTTCTGCAGAGCCCTTTGAACCAAATGTTTGAAGTTATGTTTCTACTTTAGTCAGTACTGTTGTAAT
ATTCTGAAGTCTTTCTTATTAATCAAATTTTCTATTTTATACAT
TTAACTCAATTTTGTTGGTTGTAGATCTCTTCTGCAGAGCCCTTTGAACCAAATGTTTGAAGTTATGTTTCTACTTTAGTCAGTACTGTTGTAAT
ATTCTGAAGTCTTTCTTATTAATCAAATTTTCTATTTTATACAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544034] | SGN-U562800 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344909 [Download][View] | Facility Assigned ID: TUS66C13_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.937 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |
Working
