Notice: The contact form functionality has been restored. Apologies for any inconvenience.

EST details — SGN-E544113

Search information 
Request: 544113Match: SGN-E544113
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192694Clone name: TUS-66-E12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C98442 [cLEY-7-K1] Trace: SGN-T118674 EST: SGN-E303709 Direction: 5' Facility: TIGR
Clone: SGN-C192694 [TUS-66-E12] Trace: SGN-T344989 EST: SGN-E544114 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E544113Length: 265 bp (844 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E544113 [] (trimmed) AATGTAAAAATCTCTGCTGATATAACAGAATTATTATCACAAATATGGTAGTACTATTTTACAACAATATTCACTTCAAAATAGAACCCCAATAA
TACTCCATATCCAAAACCCTGTGCTCTTTATTGTTTTTTCTGTGACTCCTTTACAATTTACATCTTTGCAATGTTATATACAGAACCTTGCTGCT
AACCTACCACCAGTTTCGGACCCTCTTCGTTCTTCCTCAGTATTACCAGCTCCTTGTTAAGGCAACANGCTCCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E544113] SGN-U565831 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344988 [Download][View] Facility Assigned ID: TUS66E12_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0148 Quality Trim Threshold: 12.5