EST details — SGN-E544178
| Search information |
| Request: 544178 | Match: SGN-E544178 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192731 | Clone name: TUS-66-G1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C95339 [cLEY-11-I10] | Trace: SGN-T118738 | EST: SGN-E306814 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E544178 | Length: 668 bp (870 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E544178 [] (trimmed)
GATTTCATTCATTTGCTTCCTTTTTCTCTTCTCCTCTCTGCTTTTATCTCTTTAAACGTCGTCGTTTCTCCACCGGTGCTCCTACTCAGACTTCC
TTTTTACAGCTTTCCGGGCTATCGGCTTGTTTTCTGAACTTATACCGTACCATATCTCAAGATGATCAAAGTCAACTCTACTCAATCCATGATTG
TGGATTGCGAAAGTTTGACTTACAAATCCTCTTGCCAAAGAACCTATAGTTTTTTTTCTACAGTCGCTTTCACGGGAAAATGCTGGAGGCTCCAA
AGTTAGCGGGACTTATAGACTTAAATGAGAACCATGATCATTATGGTCTCACACAAAATTTTTACCATAAGCTTGGAGAAGGGCCAAATATGTCT
ATCCACAGTTATGGGAGCTTGCATATGAACAATGGTGGAGGTTCAGTTGCAATGTCTATGGATAATACTAGTGTTGGATCAAATGATTCACATAC
TCGTATTTCAAATCATCACGGTCTCAAGCATGTCCACTATAACTATCCCGATGCACCTAGCGTAAATAAGGGCAAAACTTCTCATGAGTTGAGCG
ATGATGCCCTACCTAAATCGTTGATGGATCCCCGATTTCCTACCAATGGGCGTGAGAATTATGATGAGTGGACAATTGATTTGAGGTAACTCATC
ATG
TTTTTACAGCTTTCCGGGCTATCGGCTTGTTTTCTGAACTTATACCGTACCATATCTCAAGATGATCAAAGTCAACTCTACTCAATCCATGATTG
TGGATTGCGAAAGTTTGACTTACAAATCCTCTTGCCAAAGAACCTATAGTTTTTTTTCTACAGTCGCTTTCACGGGAAAATGCTGGAGGCTCCAA
AGTTAGCGGGACTTATAGACTTAAATGAGAACCATGATCATTATGGTCTCACACAAAATTTTTACCATAAGCTTGGAGAAGGGCCAAATATGTCT
ATCCACAGTTATGGGAGCTTGCATATGAACAATGGTGGAGGTTCAGTTGCAATGTCTATGGATAATACTAGTGTTGGATCAAATGATTCACATAC
TCGTATTTCAAATCATCACGGTCTCAAGCATGTCCACTATAACTATCCCGATGCACCTAGCGTAAATAAGGGCAAAACTTCTCATGAGTTGAGCG
ATGATGCCCTACCTAAATCGTTGATGGATCCCCGATTTCCTACCAATGGGCGTGAGAATTATGATGAGTGGACAATTGATTTGAGGTAACTCATC
ATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544178] | SGN-U581572 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345053 [Download][View] | Facility Assigned ID: TUS66G01_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0319 | Quality Trim Threshold: 14.5 |
Working
