EST details — SGN-E544538
| Search information |
| Request: 544538 | Match: SGN-E544538 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192941 | Clone name: TUS-66-O19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C96476 [cLEY-16-C24] | Trace: SGN-T119950 | EST: SGN-E307596 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192941 [TUS-66-O19] | Trace: SGN-T349934 | EST: SGN-E549059 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544538 | Length: 786 bp (902 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544538 [] (trimmed)
GTAAAGAGTTTGCAGCTTCTTTGGAGAGTTACAGGCAAAAATGAGAAAATAATCGATTTCTATGCTATACAACTAGATGAAGAAAAAATGAATTC
TTCTTCGGTACTAATTACAAGGGCTTTAGAAATCAACCATTTACTTCTTCTTGGCGGCCTTTCCACCAGCCTTGGAGTCTTCCTTCTTGATGACG
GACTTGATGACACCGACGGCGACGGTCTGTCTCATATCACGAACGGCGAAACGTCCTAATGGTGGGTAGTCATTGAAGGTCTCAACAACCATTGG
CTTGGTGGGTTCCATGGTGACCATGCAGGCATCACCGGACTTGACGAATTTTGGGTTGGCTTCGAGAGTCTTACCAGTACGACGATCCATCTTTT
CATCGATGTTCTTGAACTTGGTGGCAATGTGGCAGGTGTGGCAATCCAAGACTGGAGTGTAACCGTTCTGGATCTGGCCAGGGTGGGACATGATG
ATGACCTGAGCCTGGAAGGAATCAGCACCCTTGGCAGGATCTTCGGCGGCGTTGGAGGCGACGAAACCTCTCTTGATATCCTTGACGGCAATGTT
CTTGCAGTTGAAACCAACGTTGTCACCAGGGACGGCTTCAGCGAGGGATTCGTGGTGCATTTCGACGGACTTAACTTCAGTGGTTAAGCCGATTG
GGCCGAAGCACACTTGCATGTTAGGCTTCAAGACACCAGTCTCGACACGTCCGACAGGGACAGTACCGATACCACCGATCTTGTAGACGTCCCTG
TAAGGTAAACGCAATGGCTTGTCAGT
TTCTTCGGTACTAATTACAAGGGCTTTAGAAATCAACCATTTACTTCTTCTTGGCGGCCTTTCCACCAGCCTTGGAGTCTTCCTTCTTGATGACG
GACTTGATGACACCGACGGCGACGGTCTGTCTCATATCACGAACGGCGAAACGTCCTAATGGTGGGTAGTCATTGAAGGTCTCAACAACCATTGG
CTTGGTGGGTTCCATGGTGACCATGCAGGCATCACCGGACTTGACGAATTTTGGGTTGGCTTCGAGAGTCTTACCAGTACGACGATCCATCTTTT
CATCGATGTTCTTGAACTTGGTGGCAATGTGGCAGGTGTGGCAATCCAAGACTGGAGTGTAACCGTTCTGGATCTGGCCAGGGTGGGACATGATG
ATGACCTGAGCCTGGAAGGAATCAGCACCCTTGGCAGGATCTTCGGCGGCGTTGGAGGCGACGAAACCTCTCTTGATATCCTTGACGGCAATGTT
CTTGCAGTTGAAACCAACGTTGTCACCAGGGACGGCTTCAGCGAGGGATTCGTGGTGCATTTCGACGGACTTAACTTCAGTGGTTAAGCCGATTG
GGCCGAAGCACACTTGCATGTTAGGCTTCAAGACACCAGTCTCGACACGTCCGACAGGGACAGTACCGATACCACCGATCTTGTAGACGTCCCTG
TAAGGTAAACGCAATGGCTTGTCAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544538] | SGN-U579669 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345413 [Download][View] | Facility Assigned ID: TUS66O19_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 20.5 |
Working
