EST details — SGN-E544561

Search information 
Request: 544561Match: SGN-E544561
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192954Clone name: TUS-66-P8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C96570 [cLEY-16-J5] Trace: SGN-T119997 EST: SGN-E307643 Direction: 5' Facility: TIGR
Clone: SGN-C192954 [TUS-66-P8] Trace: SGN-T345435 EST: SGN-E544560 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E544561Length: 781 bp (857 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E544561 [] (trimmed) GGTCAATTTGGAAAAAGTTCACCCGTCACCACCGTCAACGCCGTTAATTCTCGCCGGCTCTTCATTCTCTAAACTCCGTCAACCCTCAATTCTTC
CCCATCTCCAAAATCCTCATAAATCCTCTCTTCTCTCTACTCCTTTGCATTTCATTCTCTCCAACATCTGATTTTTTCCGATCTCTCATCGAACT
GCTGCGATGTCGGTGAAAACTGTTAAAGTTAGCAATGTCTCCTTAGGGGCATCAGAGCGTGATATCAAGGAATTCTTTTCTTTCTCTGGTGATAT
TGAATATGTTGAGATGCAAAGTGATACTGAACGAAGTCAAATAGCATATGTTACGTTCAATGATTCTCAGGGAGCTGACACTGCAGTTCTTCTTT
CGGGTGCAACAATAGTTGATATGTCTGTTACGGTGACTTTGGATCCAGTTTACCAGCTTCCTCCTACTGCTTTTACAGCATCAGTGCCAACTGGA
AAGAAAAGTGCTGGTAATTCAGAATCCGCTTTTCAGAAAGCAGAAGACGTTGTTAGCAGCATGCTCGCAAAAGGTTATATCTTAGGTAAAGATGC
TGTAGGGAAAGCAAAGTCTTTTGATGAGAAACACCAGTTGACCTCAACTGCAACTGCTAAAGTGGCCTCTCTCGACAAAAAAATTGGTCTCACTG
AAAAGATAAGCATTGGTACTTCCATTGTTAATGACAAAGTTCGAGAGGTGGATCAGAGACTCCAAGTTTCTGATAAAGCAAAATCAGCACTTTCT
GCAGCTGAGCAAACAGTTAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E544561] SGN-U578292 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T345436 [Download][View] Facility Assigned ID: TUS66P08_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5