EST details — SGN-E544572
| Search information |
| Request: 544572 | Match: SGN-E544572 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192961 | Clone name: TUS-66-P15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C96603 [cLEY-16-L3] | Trace: SGN-T120002 | EST: SGN-E307648 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192961 [TUS-66-P15] | Trace: SGN-T345448 | EST: SGN-E544573 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544572 | Length: 587 bp (904 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544572 [] (trimmed)
GCCAGCTGAAATAGCCAATCTATATCAATCTGGATACAAAAGCATCCTACATGGTCAGGTAGAAAGTGCTAACGAAAGATAACAAATCGTACATG
AAACTAGAAGATAATTGCACATGAGCAACGATTTACAAGCAATCAAAACGGGGTGGGGTGGGGTAGGGGTGGGGGGTGGGGGGGTGTCANAACTT
GGCAGCATTAAAATTTTGGATTCTTTAGCTTAGCCAAGCATTCTAGTAATTCAAAGAGGATTATCGGATGCATATCCCATAACTTGGATTTCACC
ATCAAACTGTTTGTAGCTCAACGCCATGATTTGGAAAAAGTTGTTGCACTGGGACTAAGCCATCTTCAACCCATGATTGTGTTAGTACGTCCTGA
GTTTGTAAGAGCTGACTAAGTTCTTGTGCCGATGAATATGCTTGTGGTTGGGACATCCTGTAATATGGCTCCTTCTCATCAAGTTTTCCAGAGGA
CGTTTGGAGCATATCTCCAACAGTAGCTGACAATGTTAGGTAAATGGTATAACTTTGTGCCCTATGGGCAACCACGCTAAAGTTGCCAGTTCTCT
CCTGTCCTGGCATGACA
AAACTAGAAGATAATTGCACATGAGCAACGATTTACAAGCAATCAAAACGGGGTGGGGTGGGGTAGGGGTGGGGGGTGGGGGGGTGTCANAACTT
GGCAGCATTAAAATTTTGGATTCTTTAGCTTAGCCAAGCATTCTAGTAATTCAAAGAGGATTATCGGATGCATATCCCATAACTTGGATTTCACC
ATCAAACTGTTTGTAGCTCAACGCCATGATTTGGAAAAAGTTGTTGCACTGGGACTAAGCCATCTTCAACCCATGATTGTGTTAGTACGTCCTGA
GTTTGTAAGAGCTGACTAAGTTCTTGTGCCGATGAATATGCTTGTGGTTGGGACATCCTGTAATATGGCTCCTTCTCATCAAGTTTTCCAGAGGA
CGTTTGGAGCATATCTCCAACAGTAGCTGACAATGTTAGGTAAATGGTATAACTTTGTGCCCTATGGGCAACCACGCTAAAGTTGCCAGTTCTCT
CCTGTCCTGGCATGACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544572] | SGN-U567451 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345447 [Download][View] | Facility Assigned ID: TUS66P15_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0154 | Quality Trim Threshold: 20.5 |
Working
