EST details — SGN-E544572
Search information |
Request: 544572 | Match: SGN-E544572 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C192961 | Clone name: TUS-66-P15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C96603 [cLEY-16-L3] | Trace: SGN-T120002 | EST: SGN-E307648 | Direction: 5' | Facility: TIGR |
Clone: SGN-C192961 [TUS-66-P15] | Trace: SGN-T345448 | EST: SGN-E544573 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E544572 | Length: 587 bp (904 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544572 [] (trimmed)
GCCAGCTGAAATAGCCAATCTATATCAATCTGGATACAAAAGCATCCTACATGGTCAGGTAGAAAGTGCTAACGAAAGATAACAAATCGTACATG
AAACTAGAAGATAATTGCACATGAGCAACGATTTACAAGCAATCAAAACGGGGTGGGGTGGGGTAGGGGTGGGGGGTGGGGGGGTGTCANAACTT
GGCAGCATTAAAATTTTGGATTCTTTAGCTTAGCCAAGCATTCTAGTAATTCAAAGAGGATTATCGGATGCATATCCCATAACTTGGATTTCACC
ATCAAACTGTTTGTAGCTCAACGCCATGATTTGGAAAAAGTTGTTGCACTGGGACTAAGCCATCTTCAACCCATGATTGTGTTAGTACGTCCTGA
GTTTGTAAGAGCTGACTAAGTTCTTGTGCCGATGAATATGCTTGTGGTTGGGACATCCTGTAATATGGCTCCTTCTCATCAAGTTTTCCAGAGGA
CGTTTGGAGCATATCTCCAACAGTAGCTGACAATGTTAGGTAAATGGTATAACTTTGTGCCCTATGGGCAACCACGCTAAAGTTGCCAGTTCTCT
CCTGTCCTGGCATGACA
AAACTAGAAGATAATTGCACATGAGCAACGATTTACAAGCAATCAAAACGGGGTGGGGTGGGGTAGGGGTGGGGGGTGGGGGGGTGTCANAACTT
GGCAGCATTAAAATTTTGGATTCTTTAGCTTAGCCAAGCATTCTAGTAATTCAAAGAGGATTATCGGATGCATATCCCATAACTTGGATTTCACC
ATCAAACTGTTTGTAGCTCAACGCCATGATTTGGAAAAAGTTGTTGCACTGGGACTAAGCCATCTTCAACCCATGATTGTGTTAGTACGTCCTGA
GTTTGTAAGAGCTGACTAAGTTCTTGTGCCGATGAATATGCTTGTGGTTGGGACATCCTGTAATATGGCTCCTTCTCATCAAGTTTTCCAGAGGA
CGTTTGGAGCATATCTCCAACAGTAGCTGACAATGTTAGGTAAATGGTATAACTTTGTGCCCTATGGGCAACCACGCTAAAGTTGCCAGTTCTCT
CCTGTCCTGGCATGACA
Unigenes |
Current Unigene builds | |||||
[SGN-E544572] | SGN-U567451 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T345447 [Download][View] | Facility Assigned ID: TUS66P15_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.980 | Expected Error Rate: 0.0154 | Quality Trim Threshold: 20.5 |