EST details — SGN-E544974
| Search information |
| Request: 544974 | Match: SGN-E544974 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193195 | Clone name: TUS-67-J9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C97771 [cLEY-23-D18] | Trace: SGN-T121201 | EST: SGN-E308908 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193195 [TUS-67-J9] | Trace: SGN-T345850 | EST: SGN-E544975 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544974 | Length: 701 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544974 [] (trimmed)
GGGTAATATTCCTGTTTATATATTAACTCTCTTTACCAAATACAACACTAGTATATATNTCCTCTATCTCAAAACAATGTTACAAAAAGGTTGAC
ATGATTTGATACAATGGGCTTTCAGACTTGTGTAAAAAGACCATTATTCATCAGAATTTTTGTTTCTCGGAGTGAGAGTATACATACAAAAGGGG
AGGCTTCTTATTATTATTCCCCATTTATTTATACAAATAGAATCATAAAAAATTAGTGTTTGTTCAATTACATTATCATGTTACTCGACTTTGGT
GGTCTGTCACAATTTGCAGACATCCAACCTATTGCTTGCTTCTCATTATCATAGATCACCATTTTATCTTGCATTGATATATCTCCAATAAGGTT
GACATTTTGCAGGCCAGCTTCAGTACCATTAAGAACTCCCAAGCAGACACTGCCCTTTGATGAAATAATAAGATATGATTCAGGGGGAATTTCAA
AATGAGCTTTCGATTTCCATCCATTGCCAAAGCTAAGTGCAAACTGCTTAAAGTATTTCTTCGCATCATTTATGGTTTTGAAAGGTCTCCTGCCC
TTCCAACACAATGGGAGTGTATAATCATCCTTTGTTTCTCTTAGTGGCTTCCCATTCAGTTCTTTTCTTCATAGCGAAATGAAACCTTCGTATGT
ATGTGCGTTTAGGTAACTGGAGGAACTTCCACTGTC
ATGATTTGATACAATGGGCTTTCAGACTTGTGTAAAAAGACCATTATTCATCAGAATTTTTGTTTCTCGGAGTGAGAGTATACATACAAAAGGGG
AGGCTTCTTATTATTATTCCCCATTTATTTATACAAATAGAATCATAAAAAATTAGTGTTTGTTCAATTACATTATCATGTTACTCGACTTTGGT
GGTCTGTCACAATTTGCAGACATCCAACCTATTGCTTGCTTCTCATTATCATAGATCACCATTTTATCTTGCATTGATATATCTCCAATAAGGTT
GACATTTTGCAGGCCAGCTTCAGTACCATTAAGAACTCCCAAGCAGACACTGCCCTTTGATGAAATAATAAGATATGATTCAGGGGGAATTTCAA
AATGAGCTTTCGATTTCCATCCATTGCCAAAGCTAAGTGCAAACTGCTTAAAGTATTTCTTCGCATCATTTATGGTTTTGAAAGGTCTCCTGCCC
TTCCAACACAATGGGAGTGTATAATCATCCTTTGTTTCTCTTAGTGGCTTCCCATTCAGTTCTTTTCTTCATAGCGAAATGAAACCTTCGTATGT
ATGTGCGTTTAGGTAACTGGAGGAACTTCCACTGTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544974] | SGN-U566608 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345849 [Download][View] | Facility Assigned ID: TUS67J09_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 12.5 |
Working
