EST details — SGN-E545233
| Search information |
| Request: 545233 | Match: SGN-E545233 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193346 | Clone name: TUS-67-P16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C100544 [cLEZ-8-M2] | Trace: SGN-T122046 | EST: SGN-E310080 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193346 [TUS-67-P16] | Trace: SGN-T346109 | EST: SGN-E545234 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E545233 | Length: 738 bp (856 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E545233 [] (trimmed)
AGAGAAGTTGACCGGATGGATTTATATATAATTGAAGTCCCACTCACTTGTTACATAGTTTTGTCTTTTATTTCCTTAATAATTCAATTTCCAGA
CTATGAAATCTTAATTGTAAGAACATGAAATTGAAGTTACGTAGCATTAATTCCACAGTAAGGTTTAGCAGTGCCATGAGCCATGGAGCTAGCAC
CTGAGAGGTAGTACCAAGCTAATCCAAAATTATCAAAAGGCTTGTATTGTATAGGATGTGTTTCATCCACTAATTCCTCAGGTATTTCTGTTATT
CCTTTGTTGAATGTGAATAACGCCAATGTATACCTTTCCTTATCCTCTTTCATCAACACTTGGTGCCTTGCTGCATATATTCTTCCATTGCTCCA
TGCCTCATAAGCATCACCAGCCAAGAAGACGAAGGCGGAGGGAGGGACATCAACGTCAATCCACTCTCCACTTTTGGTTTCAACTTGCAAAGCAT
TTATTTGATTCTGAAAGAGAAGTGTGGAGAAGCTTTTATCCGTGTGTGCATTGCAACCGATATTGCCAGACCCGTCCTCCGCCCCTTGCAGTGGT
GGTCTGTACTTAATAGGGCGGAGGAGGTATGTAGTGGCTGCAACATGAGATTCATAGTGCCTTTCTGCTACTCCATAGCTCTCGAATACCATTTT
ATCCACCAATTGCTCTACTTCTGCTGCTACCTTGACGTACGATGTCACTGTTTCACAAAATCTGCGGTTGCCT
CTATGAAATCTTAATTGTAAGAACATGAAATTGAAGTTACGTAGCATTAATTCCACAGTAAGGTTTAGCAGTGCCATGAGCCATGGAGCTAGCAC
CTGAGAGGTAGTACCAAGCTAATCCAAAATTATCAAAAGGCTTGTATTGTATAGGATGTGTTTCATCCACTAATTCCTCAGGTATTTCTGTTATT
CCTTTGTTGAATGTGAATAACGCCAATGTATACCTTTCCTTATCCTCTTTCATCAACACTTGGTGCCTTGCTGCATATATTCTTCCATTGCTCCA
TGCCTCATAAGCATCACCAGCCAAGAAGACGAAGGCGGAGGGAGGGACATCAACGTCAATCCACTCTCCACTTTTGGTTTCAACTTGCAAAGCAT
TTATTTGATTCTGAAAGAGAAGTGTGGAGAAGCTTTTATCCGTGTGTGCATTGCAACCGATATTGCCAGACCCGTCCTCCGCCCCTTGCAGTGGT
GGTCTGTACTTAATAGGGCGGAGGAGGTATGTAGTGGCTGCAACATGAGATTCATAGTGCCTTTCTGCTACTCCATAGCTCTCGAATACCATTTT
ATCCACCAATTGCTCTACTTCTGCTGCTACCTTGACGTACGATGTCACTGTTTCACAAAATCTGCGGTTGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545233] | SGN-U569661 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346108 [Download][View] | Facility Assigned ID: TUS67P16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |
Working
