EST details — SGN-E545469
| Search information |
| Request: 545469 | Match: SGN-E545469 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193483 | Clone name: TUS-68-F9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C99071 [cLEZ-15-M17] | Trace: SGN-T122925 | EST: SGN-E310710 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193483 [TUS-68-F9] | Trace: SGN-T346345 | EST: SGN-E545470 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E545469 | Length: 747 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E545469 [] (trimmed)
ACAAGACAAGAATGGACAGATTTATTTTAAAATGAAGAGGAGATACAAAAACTAATTATACATACGACCTTTATTTAATCTAAAAACTGAATGAA
AAGAAGTTGGTAGGCATGCATAATCATATTTAAAAAAAACTAGTCTAGATTGCAGCCACAGCTTGGAACCTTGGTTCTTTAGGAAGGAACTTTTG
CTCATTATAAACATTCATGTAATTCCCAAACACAAAAGTTGGATAAGTAGCAATTAATTGATCCACTTTTTTTTCTTCCAAAATTAGCAGCTCTG
GTGCTGGAGAAATGGTGGCTTTCAATGAAGGATTATAGAATGAAGCAATTGATCTCCTATTACCATCTGGTTTTGACAAGACACGGTGCCAAACG
CTCTTGTATTTCCCATTGCTAAGCACTTCGATTTGATCACCTGTGTTGATCACGATGGCGTTAGGGATAGGAGGTACATCGATCCATTGTCCATT
TTTGAGGATTTGAAGACCATCAACTTGATCATCTTGAAAGAGCAAAATGACACCACCAGCATCAGTGTGAGCTCTTAGACCATTCACCTTTTCTG
GATGTGGACATGGTGGGTAATGACTCACTTTTGTACCAAAAAATGCATCATTATTATTGTTGTTATTGAAGGCTTTCTTGATGTAACCTTTTGAT
AAACCTAAATTTTCATCCATTACTTCCATCACTCTTTCTGCTAGCTTTTTCACTCTGATCTATACTCTTTCATTGTTCCCTT
AAGAAGTTGGTAGGCATGCATAATCATATTTAAAAAAAACTAGTCTAGATTGCAGCCACAGCTTGGAACCTTGGTTCTTTAGGAAGGAACTTTTG
CTCATTATAAACATTCATGTAATTCCCAAACACAAAAGTTGGATAAGTAGCAATTAATTGATCCACTTTTTTTTCTTCCAAAATTAGCAGCTCTG
GTGCTGGAGAAATGGTGGCTTTCAATGAAGGATTATAGAATGAAGCAATTGATCTCCTATTACCATCTGGTTTTGACAAGACACGGTGCCAAACG
CTCTTGTATTTCCCATTGCTAAGCACTTCGATTTGATCACCTGTGTTGATCACGATGGCGTTAGGGATAGGAGGTACATCGATCCATTGTCCATT
TTTGAGGATTTGAAGACCATCAACTTGATCATCTTGAAAGAGCAAAATGACACCACCAGCATCAGTGTGAGCTCTTAGACCATTCACCTTTTCTG
GATGTGGACATGGTGGGTAATGACTCACTTTTGTACCAAAAAATGCATCATTATTATTGTTGTTATTGAAGGCTTTCTTGATGTAACCTTTTGAT
AAACCTAAATTTTCATCCATTACTTCCATCACTCTTTCTGCTAGCTTTTTCACTCTGATCTATACTCTTTCATTGTTCCCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545469] | SGN-U568205 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346344 [Download][View] | Facility Assigned ID: TUS68F09_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 14.5 |
Working
