EST details — SGN-E545506
| Search information |
| Request: 545506 | Match: SGN-E545506 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193504 | Clone name: TUS-68-G6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C99219 [cLEZ-16-I24] | Trace: SGN-T123211 | EST: SGN-E311209 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E545506 | Length: 682 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E545506 [] (trimmed)
GGTGATTTGTAGAATTTTCAAAAAGAATTCAGGAGGGAAAAAGATAGCAATCTCAAATCTTACGAGAAGCGATAGTATAACAGATAATTCAAGGT
CTTCAAATTTGCCACCATTAATGGACTTGTCACCATACAACAAGATTACAACAACAGCGAGAAGTAGTGGAGAGACATGTAATTCACATGTGACG
TGTTTCTCCGATTCAATGGAGGATCAAAAACCTCAAACTTATGATCATCATCATCTTCTATCAAGTTCCCCTGTTTCAGTCGATTTCCCCCAAAA
CGTACCGAACGATTCGATGACCTACATGGGAAATTTCCAGTATGGAGATTCTGGATTGATGCAAGATAATTCGATTATGAGGCTTTTGATAGATA
ACAATTATGGGTCAGAATCAAAACAAAGTTTGAGAGGTTACGAAGATCATGACATCAATATCAGTTCAACTGGCCCAGTGGACATCGATTGTCTA
TGGAATTATTGATATAAACATTTAGTGAGGGACTTGGAAAAAAATGCATTAGAAATAGAAATGGGAAGAATTGAATGTGGGACACAGGAATTATG
TTAATTATTCTCAGATATTGTTTTACATCATTTGCACCAGTACTACATATCTGTTGTGTATAAATTCGTCTCCACTCAAAATAATACATAAGTTA
ATTGGTTTGTTTAATCT
CTTCAAATTTGCCACCATTAATGGACTTGTCACCATACAACAAGATTACAACAACAGCGAGAAGTAGTGGAGAGACATGTAATTCACATGTGACG
TGTTTCTCCGATTCAATGGAGGATCAAAAACCTCAAACTTATGATCATCATCATCTTCTATCAAGTTCCCCTGTTTCAGTCGATTTCCCCCAAAA
CGTACCGAACGATTCGATGACCTACATGGGAAATTTCCAGTATGGAGATTCTGGATTGATGCAAGATAATTCGATTATGAGGCTTTTGATAGATA
ACAATTATGGGTCAGAATCAAAACAAAGTTTGAGAGGTTACGAAGATCATGACATCAATATCAGTTCAACTGGCCCAGTGGACATCGATTGTCTA
TGGAATTATTGATATAAACATTTAGTGAGGGACTTGGAAAAAAATGCATTAGAAATAGAAATGGGAAGAATTGAATGTGGGACACAGGAATTATG
TTAATTATTCTCAGATATTGTTTTACATCATTTGCACCAGTACTACATATCTGTTGTGTATAAATTCGTCTCCACTCAAAATAATACATAAGTTA
ATTGGTTTGTTTAATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545506] | SGN-U586243 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346381 [Download][View] | Facility Assigned ID: TUS68G06_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0026 | Quality Trim Threshold: 12.5 |
Working
