EST details — SGN-E545635
| Search information |
| Request: 545635 | Match: SGN-E545635 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193580 | Clone name: TUS-68-J10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C99669 [cLEZ-18-M12] | Trace: SGN-T123573 | EST: SGN-E311358 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193580 [TUS-68-J10] | Trace: SGN-T346511 | EST: SGN-E545636 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E545635 | Length: 831 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E545635 [] (trimmed)
AAGTAAACCAAGTAGTTTGTAAAATAATTAAGATAGATAATGCAAGTGTTTTTCCTGAGTAGTTTAACTATGTTTATATACAAAAATTGACCAAG
ATATAGAGCCTACATAGGCACAAGCTCGGGGCACAAATTAATACTGTAGGAGACAGTAAACTGGGAGTGAGCGGAAATGATTCAAAAGAATATAC
ATACTAAAATATTCCTGTATACAACTCTTCATCTCCCTCTAGGTTTCTGTTCATCACCACCTGCACCGTCTTTAGTAGCTAGTTGAAGTCTATTG
GTTCCGGCTGAACGCGGATTTAGAGGATCTTTTTCCTGGACTAGTCGAGGTTCTGAACGGAAAGGAAATTCATCAGCCTCTAGCATATGTACTAT
TTGACCCATCTTTGGCCGCTTGTTGGCATCCATATCTATGCAGCGAAGGCAGACCAACAAAACCCGCTTTAGGGATCTAGGAGGAGGATGGACTT
CAATTAATGGGTCGACCAATTCTTCACCACGTCGATTTGATACCATTCCTTTAAACCAATCGACCAAGTTCATCTCCCCAGGCGGTCTCGAATAG
TCAACAGGACTTCTTCCTGTAATTATCTCCATGAGCATAACACCAAAGCTATACACGTCGCTCCCCTCATTAAGCATACCAGTGCTGGCATAGTC
AGGAGAAACATATCCAAAAGTTCCCATAACACGGGTAGTCACATAGCTTTTCTCAGGTCCTAGCAGCTTGGCAAGTCCAAAATCTGATACTTTTG
GATTCCATTTCCTATCCAACAGAATATTACTTGATTTTACATCACGATGCACAACTTTGGGTTCCAACCTT
ATATAGAGCCTACATAGGCACAAGCTCGGGGCACAAATTAATACTGTAGGAGACAGTAAACTGGGAGTGAGCGGAAATGATTCAAAAGAATATAC
ATACTAAAATATTCCTGTATACAACTCTTCATCTCCCTCTAGGTTTCTGTTCATCACCACCTGCACCGTCTTTAGTAGCTAGTTGAAGTCTATTG
GTTCCGGCTGAACGCGGATTTAGAGGATCTTTTTCCTGGACTAGTCGAGGTTCTGAACGGAAAGGAAATTCATCAGCCTCTAGCATATGTACTAT
TTGACCCATCTTTGGCCGCTTGTTGGCATCCATATCTATGCAGCGAAGGCAGACCAACAAAACCCGCTTTAGGGATCTAGGAGGAGGATGGACTT
CAATTAATGGGTCGACCAATTCTTCACCACGTCGATTTGATACCATTCCTTTAAACCAATCGACCAAGTTCATCTCCCCAGGCGGTCTCGAATAG
TCAACAGGACTTCTTCCTGTAATTATCTCCATGAGCATAACACCAAAGCTATACACGTCGCTCCCCTCATTAAGCATACCAGTGCTGGCATAGTC
AGGAGAAACATATCCAAAAGTTCCCATAACACGGGTAGTCACATAGCTTTTCTCAGGTCCTAGCAGCTTGGCAAGTCCAAAATCTGATACTTTTG
GATTCCATTTCCTATCCAACAGAATATTACTTGATTTTACATCACGATGCACAACTTTGGGTTCCAACCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545635] | SGN-U581569 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346510 [Download][View] | Facility Assigned ID: TUS68J10_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |
Working
