EST details — SGN-E545653
Search information |
Request: 545653 | Match: SGN-E545653 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C193590 | Clone name: TUS-68-J20 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C99731 [cLEZ-19-A10] | Trace: SGN-T123832 | EST: SGN-E310631 | Direction: 5' | Facility: TIGR |
Clone: SGN-C193590 [TUS-68-J20] | Trace: SGN-T350117 | EST: SGN-E549242 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E545653 | Length: 650 bp (915 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E545653 [] (trimmed)
GGCAACCACCTAACATTTGCTTCGTACAAAAAAAATTATGGCTGAAACTCAAGAAACAGTTTCCAAATCAGTACAAGAACTAGCAAATACCAATC
AAGTTCCAGAAAAGTATATTTATGCACAAGGATCAATCAATACCTATCCTCTTTTGTTCGATGTGCCACAAGTTGATCTTAGCCTTCTCACATCC
CCTAACAGACAACAACAGCTCAACAAACTTCAATCAGGTCTCAAGTCTTGTGGCTGTATCCAGGTCATAAATCATGGAATGGAAGATTCATTTCT
TGACAAAGTGCGTGAAATAAGCAAAAAGTTCTTTGCTCTTCCAACTGAAGAGAAGCTTAAATATGCAAGAACAGTTAATCAAATTGAAGGATACG
GAAATGATAAAGTTCTTACAGATAAGCAAAGGCTTGATTGGTCCGATAGACTGTGTCTAAATGTGTTCCCTGAAGATATAAGAGAACTCCGATTC
TGGCCACAAAAACCTGAATGTTTTAGGGAAGTTTTTGGAGAATATATGAAGAATATGAAGTTGTTGAGTGAGTCCCTCCTAAAGGCCATGGCAGC
GTCATTGAACGTGGAGGAGAATTGCTTTCTGGACCAGTGTGGAGAACGTGGGATGACTACTGCAAGATTCAACTTCTACC
AAGTTCCAGAAAAGTATATTTATGCACAAGGATCAATCAATACCTATCCTCTTTTGTTCGATGTGCCACAAGTTGATCTTAGCCTTCTCACATCC
CCTAACAGACAACAACAGCTCAACAAACTTCAATCAGGTCTCAAGTCTTGTGGCTGTATCCAGGTCATAAATCATGGAATGGAAGATTCATTTCT
TGACAAAGTGCGTGAAATAAGCAAAAAGTTCTTTGCTCTTCCAACTGAAGAGAAGCTTAAATATGCAAGAACAGTTAATCAAATTGAAGGATACG
GAAATGATAAAGTTCTTACAGATAAGCAAAGGCTTGATTGGTCCGATAGACTGTGTCTAAATGTGTTCCCTGAAGATATAAGAGAACTCCGATTC
TGGCCACAAAAACCTGAATGTTTTAGGGAAGTTTTTGGAGAATATATGAAGAATATGAAGTTGTTGAGTGAGTCCCTCCTAAAGGCCATGGCAGC
GTCATTGAACGTGGAGGAGAATTGCTTTCTGGACCAGTGTGGAGAACGTGGGATGACTACTGCAAGATTCAACTTCTACC
Unigenes |
Current Unigene builds | |||||
[SGN-E545653] | SGN-U563057 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T346528 [Download][View] | Facility Assigned ID: TUS68J20_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.949 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |