EST details — SGN-E545737
| Search information |
| Request: 545737 | Match: SGN-E545737 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193639 | Clone name: TUS-68-L21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C100134 [cLEZ-20-J15] | Trace: SGN-T124085 | EST: SGN-E312617 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193639 [TUS-68-L21] | Trace: SGN-T350131 | EST: SGN-E549256 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E545737 | Length: 816 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E545737 [] (trimmed)
GGACGCATCCTTTGGATATCCTGGGGGACCAATATTGTTCAAAAATTTGAATTTTGGAATAGATTTGGATAGCAGAGTAGCAATGGTTGGTCCTA
ATGGTATTGGAAAGTCAACAATACTTAAGCTTATTTCTGGGGAGCTTCAACCAACCTCAGGGACTGTTTTCCGCTCTGCTAAGGTCCGTATTGCT
GTATTTAGTCAGCATCATGTTGATGGGCTGGATCTGTCCTCAAATCCCCTCTTATACATGATGCGTTGCTTTCCAGGAGTGCCTGAACAAAAATT
ACGTGGTCATCTAGGTTCATTTGGTATAACCGGAAATCTTGCTCTTCAGCCCATGTACACTTTATCTGGTGGCCAAAAAAGCAGAGTTGCATTTG
CAAAGATAACTTTCAAGAAACCTCACATATTGCTTCTTGATGAGCCGTCAAATCACTTGGATCTGGACGCTGTGGAAGCCTTGATACAAGGTCTT
GTCTTGTTCCAAGGAGGCGTCCTGATGGTCAGTCACGATGAACATTTAATATCTGGCAGTGTTGATCAACTCTGGGCTGTCTCTGAGGGCAGAGT
GACGCCTTTTGACGGGACATTCCAAGATTACAAGAAAATATTGCAATCATAAACACTTCTGCTGCTTTCTGAAGTGAACGAACTATAATTAGTTA
CTTATGGCCTAAACCCCTACTTTTATGCAGAGACCACATGTTCGATGTAAAATTTCGAAACCAAATTCTGAAGAATGTTCTAAAACAAATAGTGA
TTTTCTACTCCTACTTGCTTCTATTTACACTGTCCAAATTGGACAAAACATTTTCT
ATGGTATTGGAAAGTCAACAATACTTAAGCTTATTTCTGGGGAGCTTCAACCAACCTCAGGGACTGTTTTCCGCTCTGCTAAGGTCCGTATTGCT
GTATTTAGTCAGCATCATGTTGATGGGCTGGATCTGTCCTCAAATCCCCTCTTATACATGATGCGTTGCTTTCCAGGAGTGCCTGAACAAAAATT
ACGTGGTCATCTAGGTTCATTTGGTATAACCGGAAATCTTGCTCTTCAGCCCATGTACACTTTATCTGGTGGCCAAAAAAGCAGAGTTGCATTTG
CAAAGATAACTTTCAAGAAACCTCACATATTGCTTCTTGATGAGCCGTCAAATCACTTGGATCTGGACGCTGTGGAAGCCTTGATACAAGGTCTT
GTCTTGTTCCAAGGAGGCGTCCTGATGGTCAGTCACGATGAACATTTAATATCTGGCAGTGTTGATCAACTCTGGGCTGTCTCTGAGGGCAGAGT
GACGCCTTTTGACGGGACATTCCAAGATTACAAGAAAATATTGCAATCATAAACACTTCTGCTGCTTTCTGAAGTGAACGAACTATAATTAGTTA
CTTATGGCCTAAACCCCTACTTTTATGCAGAGACCACATGTTCGATGTAAAATTTCGAAACCAAATTCTGAAGAATGTTCTAAAACAAATAGTGA
TTTTCTACTCCTACTTGCTTCTATTTACACTGTCCAAATTGGACAAAACATTTTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545737] | SGN-U566380 | Tomato 200607 | Build 2 | 58 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346612 [Download][View] | Facility Assigned ID: TUS68L21_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
