EST details — SGN-E545838

Search information 
Request: 545838Match: SGN-E545838
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C193698Clone name: TUS-68-O8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C103173 [cLHT-5-L2] Trace: SGN-T169947 EST: SGN-E354731 Direction: 5' Facility: TIGR
Clone: SGN-C193698 [TUS-68-O8] Trace: SGN-T346714 EST: SGN-E545839 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E545838Length: 781 bp (921 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E545838 [] (trimmed) GTACAAAAAGCAAACATTACATTTTCGGCTAAACAAATAAGATACTTCGGGAAATGAATTTCATGTTTATTGTACATAAAATTGAAAGACGAAAT
GAAAATTTGGAGCAACGTTAGATGAGTCTACTATAGAAAGACAATAGCTAGAAATTAAAAACAAGAAAATCACTTGGAACTCCCCTCCACAAAAA
AATCAAATATTTCCCCAGCCAGCTATAATTGAGCTTTCAGTTCCTTCACTGATTTGATTTTTGAATCACAAATTCTAAGGAAATTAGATAAAGAA
GTTCGCTGACTAGTAATGATTTTTCTAGTAATATCAACAGGACTCCAAGACTGCAATGCTCCAGTGATCACATCACCAAGACCTTTATCAATTGT
TGAAGACGAGGTTAAAGTTTCAATAACGCGGTAGACCTTCCAGGGTCCTAACTCTCCATCTCTTTTGAGTGATGAAAGTATACTTTCCAATTTGT
CATTGTCTGACTTGCTCATTTGTTGATTTAGCCAATCTCTAACCAGCTCTATAGTCTCACATACACAACGGATTGAATCCTGTACTTCTTGACAC
AACTCAATGTTACACTGCTCCGAAGGTCCACCTTTCTTTTTTCTCTTTCCTGAAGGCAATAATGACCTGGCACAACACTGAATCACCATAATATG
CCAAGCTAAAGGCTCAGTTACCAATAGCACCAAATGAGGAAGATCACATCCGGGTGATGACTCTGGTGCTCCCATTGATCTCACTTTATCCAGGA
TACACTTCTTCAGAATCAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E545838] SGN-U569621 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T346713 [Download][View] Facility Assigned ID: TUS68O08_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5