EST details — SGN-E546010

Search information 
Request: 546010Match: SGN-E546010
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C193798Clone name: TUS-69-C12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C101125 [cLHT-12-E7] Trace: SGN-T170031 EST: SGN-E355845 Direction: 5' Facility: TIGR
Clone: SGN-C193798 [TUS-69-C12] Trace: SGN-T350176 EST: SGN-E549301 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E546010Length: 709 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E546010 [] (trimmed) AGTTGTATACATTTCTCAAAAGTGTATATTTGTTATACAAACTGCAAATCAAATCAAATAGGAACAAAAGTCCTACTCCATGATGAAATAGAACA
GTTGGCCATTAGCTCATGGGAGAAAAAAGTCCCACTACAAAGAACAGACCAAATGACAAAAAAAGGGAAAGAAAGAAACAAGTTGCAAAGTTTTT
TACACAGATTGTGGGACCAGCAAAAGCTTATGCAATTGCAGTTCATGGTAGTAATACTACCTAGCTTGCATGTCCTCTTCAGTTTTCCACACTAC
ATCCTCTAGACTAGTCGAAAGATTCTTGTAGAACTTGTGGAATTCCAAAGTATCTCCTTTTGCCTTTCGCACTTCAACCATATGAAGAGAAGGGG
CAACTTGAAATACCTCAGTGGCAACATTAAGGTTCCCTTTTCTTCCAGCTTTGACATTTTCAAGTCTCATCTTGTAGTTCTTTTTGTGAACATCA
AAACCGAGGGGCTTTGCAGCTTCTTCAATCTTACTGATAATTTCATTGGCCGAGCATTTAGATGTGAACCTTGTTTCTCTCTTAAATTCCTGTGA
ATGTCGGAATCAAAACATCTGTGAATGAAGTAATATTATAGCAATACACAAATCATCAATGTCTCCGACAAGGTGGAATACCAATTTATATTGAT
TTGAATTGTTGGNTGGGATAAATGGCCATTCGGGAAAAGAGACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E546010] SGN-U580739 Tomato 200607 Build 2 36 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T346885 [Download][View] Facility Assigned ID: TUS69C12_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5