EST details — SGN-E546081
Search information |
Request: 546081 | Match: SGN-E546081 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C193839 | Clone name: TUS-69-E5 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C101314 [cLHT-17-L17] | Trace: SGN-T170826 | EST: SGN-E357161 | Direction: 5' | Facility: TIGR |
Clone: SGN-C193839 [TUS-69-E5] | Trace: SGN-T346955 | EST: SGN-E546080 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E546081 | Length: 712 bp (899 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546081 [] (trimmed)
GCCCGTCTATATTGAAAGACTTGGCAAGATTGAACCTACTAAACTTATGAACGTTACCACAATAGAAAGGTTCTTAAAGTATCACATCCAAGGGT
TTGAAAGGACTTTTGCTGAAAAATTTCCAGCATGTTCGATCGCAGCTAGGAGGCATATAGATTCATCTACTACAATCTTGGATGTTCAAGGACTG
AATTGGAGGAGTTTTGGGAAACTTGCCCATGATTTGGTCATGCGCATGCAAAAGATAGATGGCGACAACTATCCAGAGACATTGCACCAGATGTT
TATTGTCAATGCTGGAAATGGATTTAGATTTCTATGGAATACTGCAAAAGGATTTCTTGATCCAAAGACAACAGCAAAAATTCATGTATTGGGAA
ACAAATTCCAGAGCAACTTAGCAGAAGTCATAGACCCCAGCCAATTGCCAGATTTTCTTGGAGGAACCTGCTCATGCCCAAATCCAGATGGGTGT
CTTAGGTCTGATAAAGGACCCTGGAATGATCCAGAGCTGATGAAGCTGGTCCATGCATTGCATGGTGAAGCACTTTATCCCAGGAGAATTACAAG
CTACTCCGATAGTGATATCGAAATCAAACCAGTTTCTCCACAGTTACTACGCAACGAGATTGGTTCGGCAGAATCTGATGTGGAAGTGGGGGTCT
CAGCTTACAGTATCATGCAATCAAAACAACTTTCAGACAAAGTACCA
TTGAAAGGACTTTTGCTGAAAAATTTCCAGCATGTTCGATCGCAGCTAGGAGGCATATAGATTCATCTACTACAATCTTGGATGTTCAAGGACTG
AATTGGAGGAGTTTTGGGAAACTTGCCCATGATTTGGTCATGCGCATGCAAAAGATAGATGGCGACAACTATCCAGAGACATTGCACCAGATGTT
TATTGTCAATGCTGGAAATGGATTTAGATTTCTATGGAATACTGCAAAAGGATTTCTTGATCCAAAGACAACAGCAAAAATTCATGTATTGGGAA
ACAAATTCCAGAGCAACTTAGCAGAAGTCATAGACCCCAGCCAATTGCCAGATTTTCTTGGAGGAACCTGCTCATGCCCAAATCCAGATGGGTGT
CTTAGGTCTGATAAAGGACCCTGGAATGATCCAGAGCTGATGAAGCTGGTCCATGCATTGCATGGTGAAGCACTTTATCCCAGGAGAATTACAAG
CTACTCCGATAGTGATATCGAAATCAAACCAGTTTCTCCACAGTTACTACGCAACGAGATTGGTTCGGCAGAATCTGATGTGGAAGTGGGGGTCT
CAGCTTACAGTATCATGCAATCAAAACAACTTTCAGACAAAGTACCA
Unigenes |
Current Unigene builds | |||||
[SGN-E546081] | SGN-U580505 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T346956 [Download][View] | Facility Assigned ID: TUS69E05_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.974 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 14.5 |