EST details — SGN-E546100

Search information 
Request: 546100Match: SGN-E546100
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C193850Clone name: TUS-69-E16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C101392 [cLHT-18-J21] Trace: SGN-T170584 EST: SGN-E355742 Direction: 5' Facility: TIGR
Clone: SGN-C193850 [TUS-69-E16] Trace: SGN-T346974 EST: SGN-E546099 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E546100Length: 704 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E546100 [] (trimmed) GGCAAAGTAAAATAAAATTTTATCGACCACACACAATAATCTTTCAATCCTAGATAACGATTTTGCTAGAAAAAAAAAATACATGTTGATGATGG
AAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATAT
ATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAA
AATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAGTTGGTGAATCACGGAGTGAGTTCAT
CATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAA
GGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACC
TCACTTGTTTCCGAAGCTTCCTGCCTCACTCAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAA
TGGCAAGAGCTTTANGGATGAGAACAGAGGATATGAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E546100] SGN-U586249 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T346975 [Download][View] Facility Assigned ID: TUS69E16_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0123 Quality Trim Threshold: 14.5