EST details — SGN-E546105
Search information |
Request: 546105 | Match: SGN-E546105 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C193853 | Clone name: TUS-69-E19 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C101407 [cLHT-18-P15] | Trace: SGN-T170616 | EST: SGN-E355774 | Direction: 5' | Facility: TIGR |
Clone: SGN-C193853 [TUS-69-E19] | Trace: SGN-T346979 | EST: SGN-E546104 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E546105 | Length: 754 bp (884 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546105 [] (trimmed)
GGCAAAGTAAAATAAAATTTTATCGACCACACACAATAATCTTTCAATCCTAGATAACGATTTTGCTAGAAAAAAAAAAACATGTTGATGATGGA
AGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATATA
TTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAA
ATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAGTTGGTGAATCACGGAGTGAGTTCATC
ATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAG
GATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCT
CACTTGTTTCCGAAGCTTCCTGCCTCACTCAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAAT
GGCAAGAGCTTTAGGGATGAGAACAGAGGATATGAATGTTTTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTC
AGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATATA
TTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAA
ATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAGTTGGTGAATCACGGAGTGAGTTCATC
ATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAG
GATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCT
CACTTGTTTCCGAAGCTTCCTGCCTCACTCAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAAT
GGCAAGAGCTTTAGGGATGAGAACAGAGGATATGAATGTTTTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTC
Unigenes |
Current Unigene builds | |||||
[SGN-E546105] | SGN-U586249 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T346980 [Download][View] | Facility Assigned ID: TUS69E19_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.958 | Expected Error Rate: 0.0041 | Quality Trim Threshold: 14.5 |