EST details — SGN-E546121

Search information 
Request: 546121Match: SGN-E546121
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C193863Clone name: TUS-69-F5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C101620 [cLHT-20-E22] Trace: SGN-T171483 EST: SGN-E356473 Direction: 5' Facility: TIGR
Clone: SGN-C193863 [TUS-69-F5] Trace: SGN-T346997 EST: SGN-E546122 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E546121Length: 762 bp (899 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E546121 [] (trimmed) GAAAACATCATGCCGCTTTGCACCACTTCCCACTGGGGCAGCATGCACAAATTTCAAATCATTATTTTCAACATTGTTTAACAATAGGTTTAAGT
GGAAGCTGCTAAGCAATATTTTCATAAAAAAATTCCGATAACAAACTTGTTAGCTATGCATTAAATTCGCGGTCCTTCTGTACAGAAAATATGTA
AGTTACGTCCAGAACTAGTTGTTCACACGTCAATTATGTACAAATATGAATGTAATCCAACTATAACATCACACTCCCGCCTCTAAAGAAAAATG
AGGCAGAGTGCAACACTCTAGCAAAGCTTACTCAATCACCAACTCGAAAGCCCATTGTGTATATTTCCAGCATGGTCCTTTTACCTGCAAACTTC
GTCTCGAGTATATACCAGGATTGAATCCAAATTGTTGACACACCTAAAGATCAACCTAAGGCATCAATGCTGTTCCCACCCAAATCAAGTTTTGT
ATTGTGAAGGCCTGCCTCTCCGCCAACATGAGTTTGTCACTTTCAATTTGTTCTCCTTCAAAGATTCCATGGATTCAGCAAGCTCTACTTGTTGC
GATGCTGTTGCAAGTAGTGCTTTCTTCGTCCTCTGCAAGTCATACTCTATGAACTTTATGCGGTCCATTGAATCAAGCAGCATGTGCTCTTTTTC
TGGAGGAAATTTTGGTAGGTTTCTTCAACAAATCAGCTACGACGTTCTCTAAATGTTGCAACCTCTGACAGCATGGATGGGAGAGATCCTCCTTT
TT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E546121] SGN-U590536 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T346996 [Download][View] Facility Assigned ID: TUS69F05_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0120 Quality Trim Threshold: 14.5