EST details — SGN-E546185
| Search information |
| Request: 546185 | Match: SGN-E546185 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193900 | Clone name: TUS-69-G18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101781 [cLHT-22-A10] | Trace: SGN-T171017 | EST: SGN-E358532 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E546185 | Length: 809 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546185 [] (trimmed)
CTCAAGACATATTATACAAAACTGGTCTCAACCAGATGTGAAAAATGGTTACTAAATGTCATACATACATACCAAGATCAAAAGAATTTTAATAT
ACAGCTTGGTAAAATTGTTGGTTCATGAAATGACATGAGATGCTGCTATTATATCCACAATACTACTTACAAAACGACGCAGCATCTACGTTTAA
TAAACGAGGCTCGTTGCAGCTGGAAGCTTTCATGACAAGAACCAATATTCACATGTGACAATATTAAACCCGATCCATTGGTGCAGGCACAGACG
AAGAGTCCGTTGATGCAGGAACAGATGGTGTAGCTGATGCCATGGCAAACTGTACACCTGTTGGCTGCCCAGATTGTACCACAAATGCAAATTGT
GCTGTTGCTAATGCTGCAGCTTCCTCTCTTTGCCTGCGCTGCTGCAAAATGCTGATGGCCCAGACCATGATGTAGCAAGGTAAAAGAAAGCCAAT
TAACCGAAGCAAGAAAAGCGAGAAGAAAGCAGAGGGGTCTTCGTCATCTCCATCTGCATCTGCTACAGGTAATGCATGTCGCAAGAGCAGAAAAG
CCATTAAAATTAGAGCAGCAGAACGGCAGAACGCAACACCACTTGCATTTGTAGCATTATAATCATCATATTCAGCTTCCAAAAGTTGGCGTTCA
GCCTCTCTAATTGCCAAAAGGCGAGGATCGTGTAATTCCAGAGGTGTGCCAGCAATTTGCCATCCTCCCCCAATATCTATAATTGTATCCTCTGA
CCGAGCTCGAGGAAGGGCAGTGTAACCAGNCTGGTATTGCTGATGGCAA
ACAGCTTGGTAAAATTGTTGGTTCATGAAATGACATGAGATGCTGCTATTATATCCACAATACTACTTACAAAACGACGCAGCATCTACGTTTAA
TAAACGAGGCTCGTTGCAGCTGGAAGCTTTCATGACAAGAACCAATATTCACATGTGACAATATTAAACCCGATCCATTGGTGCAGGCACAGACG
AAGAGTCCGTTGATGCAGGAACAGATGGTGTAGCTGATGCCATGGCAAACTGTACACCTGTTGGCTGCCCAGATTGTACCACAAATGCAAATTGT
GCTGTTGCTAATGCTGCAGCTTCCTCTCTTTGCCTGCGCTGCTGCAAAATGCTGATGGCCCAGACCATGATGTAGCAAGGTAAAAGAAAGCCAAT
TAACCGAAGCAAGAAAAGCGAGAAGAAAGCAGAGGGGTCTTCGTCATCTCCATCTGCATCTGCTACAGGTAATGCATGTCGCAAGAGCAGAAAAG
CCATTAAAATTAGAGCAGCAGAACGGCAGAACGCAACACCACTTGCATTTGTAGCATTATAATCATCATATTCAGCTTCCAAAAGTTGGCGTTCA
GCCTCTCTAATTGCCAAAAGGCGAGGATCGTGTAATTCCAGAGGTGTGCCAGCAATTTGCCATCCTCCCCCAATATCTATAATTGTATCCTCTGA
CCGAGCTCGAGGAAGGGCAGTGTAACCAGNCTGGTATTGCTGATGGCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546185] | SGN-U573344 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347060 [Download][View] | Facility Assigned ID: TUS69G18_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
