EST details — SGN-E546367
Search information |
Request: 546367 | Match: SGN-E546367 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C194006 | Clone name: TUS-69-L4 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C102194 [cLHT-24-A16] | Trace: SGN-T170327 | EST: SGN-E358767 | Direction: 5' | Facility: TIGR |
Clone: SGN-C194006 [TUS-69-L4] | Trace: SGN-T347243 | EST: SGN-E546368 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E546367 | Length: 583 bp (888 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546367 [] (trimmed)
ATGGGCCAAACAATCCTATATCAGCTTTCACTACTGAAACATAATTGTTTTTGGTGAGAATGGAAATAAAACATACAAAGATGGCTTATTAAAAA
TTATCTACGATCAAGTCTCCGATAGAATGTACCCCAAACTCCTTAGCCGCGGAATTCATCCATGAACAGCTTATGGAATTCTGTAAGACGAGATA
CAATAGCTGGGATCTTCTCTTCTTGCGGTAATATTGTGCACCTAAAATGCCACGTTCCAGGACGCTGGCCAAATCCAGAGCCTGGGACAACAACA
ATTCCCGTAGCATTAAGGAGGTGCCGAGCATAAAATGCATCTGGGGCAATTTTAGCTTCTTCTGCTGCTTTTATTGCTTTGTCAGGGAAGTTGAT
ACGTGGAAATAGATACATTGCACCCTCTGCTTTATTGCATGTTACTCCCTCCAAATTGCTGAAAGCATCTTCTAGTGTCTTTGCACGTCTTGCCA
AGGATGAGAGTATCCCTTCTTTCTCAGCAGCAAAAGACTCGTATGATTCATCACCCACCTTTGGAGGGCTCATGACAAGGCTCGCAAGAATCTGA
CCAGAAATGTTGG
TTATCTACGATCAAGTCTCCGATAGAATGTACCCCAAACTCCTTAGCCGCGGAATTCATCCATGAACAGCTTATGGAATTCTGTAAGACGAGATA
CAATAGCTGGGATCTTCTCTTCTTGCGGTAATATTGTGCACCTAAAATGCCACGTTCCAGGACGCTGGCCAAATCCAGAGCCTGGGACAACAACA
ATTCCCGTAGCATTAAGGAGGTGCCGAGCATAAAATGCATCTGGGGCAATTTTAGCTTCTTCTGCTGCTTTTATTGCTTTGTCAGGGAAGTTGAT
ACGTGGAAATAGATACATTGCACCCTCTGCTTTATTGCATGTTACTCCCTCCAAATTGCTGAAAGCATCTTCTAGTGTCTTTGCACGTCTTGCCA
AGGATGAGAGTATCCCTTCTTTCTCAGCAGCAAAAGACTCGTATGATTCATCACCCACCTTTGGAGGGCTCATGACAAGGCTCGCAAGAATCTGA
CCAGAAATGTTGG
Unigenes |
Current Unigene builds | |||||
[SGN-E546367] | SGN-U580998 | Tomato 200607 | Build 2 | 69 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T347242 [Download][View] | Facility Assigned ID: TUS69L04_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.968 | Expected Error Rate: 0.0144 | Quality Trim Threshold: 14.5 |