EST details — SGN-E546475
| Search information |
| Request: 546475 | Match: SGN-E546475 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194069 | Clone name: TUS-69-N19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102500 [cLHT-28-E16] | Trace: SGN-T171515 | EST: SGN-E358257 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194069 [TUS-69-N19] | Trace: SGN-T347351 | EST: SGN-E546476 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546475 | Length: 828 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546475 [] (trimmed)
AATTTAATCATATATATACATATAAGACGCCAAGTATCTGTAAACACCAAGAGCAGCCTGTAGCTACATACAATAAATCTACAAGCTCAGTTCTT
TTTTTCTAAGACTAGAATCTCATTTCTCCAATCAATTGGATCACATCCCTTAATGGTAAACCTAATTTAGTAGTTACACTTACATCACACTGCTT
TATGAAAATTCTTCAACACTTCCAGCAGTTGAGTTTTCTTCCCTATTCACAACAGAAATTTCCACTGATTCAGGCCCTTCTACTCTACGCTGCTT
TATGACGTAGCAGATGAAACAGCATGGACTTGAAAGTCTAATCCATGGTCCTTTTGAGTTGAATTATCTTCAAGCATCTCCCATCGTTCTTTATG
TAGCCTCAATTTCTCTGTTTCACCATCATCATATACGACCTTGTGTTTCCTTTCCACAGGATCAAAAGAAGAAACTACTCCCTCGTAAAACTTTT
CATCCAATGTCCACCAAACTTTTATCCTAGCGCCAACCAGTTCCTTACCATAATCTTTCATGGTAAAAGTCCTTTTAAAATCCTTTTGAGATGAA
TTGTCTTCAAGCATCGTCCAACGTTGTTTATATAGTGTCAAAATCTCTACTTCACCATCATCATATACGACCTTGTGTTTGTTTGTCTCAAAATC
AAAAGAAGAAATGACTCCCTCGTAAAACTTTTCATCCAATGGCCACCAAACTTTTATTCTATCGCCAATCAGTTCCTTACCATAATCTTTGATGG
AACAAAGCCTTTTGGAATCCTTTTGAGATNGATTGTCTTCAAGCATTTCCCATCGTTCTTTATGTAGT
TTTTTCTAAGACTAGAATCTCATTTCTCCAATCAATTGGATCACATCCCTTAATGGTAAACCTAATTTAGTAGTTACACTTACATCACACTGCTT
TATGAAAATTCTTCAACACTTCCAGCAGTTGAGTTTTCTTCCCTATTCACAACAGAAATTTCCACTGATTCAGGCCCTTCTACTCTACGCTGCTT
TATGACGTAGCAGATGAAACAGCATGGACTTGAAAGTCTAATCCATGGTCCTTTTGAGTTGAATTATCTTCAAGCATCTCCCATCGTTCTTTATG
TAGCCTCAATTTCTCTGTTTCACCATCATCATATACGACCTTGTGTTTCCTTTCCACAGGATCAAAAGAAGAAACTACTCCCTCGTAAAACTTTT
CATCCAATGTCCACCAAACTTTTATCCTAGCGCCAACCAGTTCCTTACCATAATCTTTCATGGTAAAAGTCCTTTTAAAATCCTTTTGAGATGAA
TTGTCTTCAAGCATCGTCCAACGTTGTTTATATAGTGTCAAAATCTCTACTTCACCATCATCATATACGACCTTGTGTTTGTTTGTCTCAAAATC
AAAAGAAGAAATGACTCCCTCGTAAAACTTTTCATCCAATGGCCACCAAACTTTTATTCTATCGCCAATCAGTTCCTTACCATAATCTTTGATGG
AACAAAGCCTTTTGGAATCCTTTTGAGATNGATTGTCTTCAAGCATTTCCCATCGTTCTTTATGTAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546475] | SGN-U576286 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347350 [Download][View] | Facility Assigned ID: TUS69N19_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |
Working
