EST details — SGN-E546603
| Search information |
| Request: 546603 | Match: SGN-E546603 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194143 | Clone name: TUS-70-A21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102851 [cLHT-31-O15] | Trace: SGN-T171666 | EST: SGN-E359280 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194143 [TUS-70-A21] | Trace: SGN-T347477 | EST: SGN-E546602 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546603 | Length: 763 bp (924 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546603 [] (trimmed)
GGGCTTCTCCATTAGGTACTCCCCAGCAGGTGATCCTTATCAATGGTCAATTCCCTGGTCCTAGGCTTGACCTTGTCACTAATGATAATATCGTC
CTCAACTTGATTAATAAGTTGGATGAGCCCCTTCTTTTGACATGGAACGGAATCAAACAGAGAAAGAACTCTTGGCAAGACGGTGTTTTGGGGAC
AAATTGTCCTATTCCTCCAAACAGAAATTACATTTACAAGTTTCAACCTAAAGATCAGATTGGGAGCTATAATTATTTTCCTTCAACTCAACTGC
ACAGAGCTGCTGGAGGTTTTGGAGTGCTTAATGTTTATGCGAGATCTGTAATCCCCGTTCCATATGCAAAACCTGCTGGAGATTTCAGTTTGCTT
ATTGGTGATTGGTACAAGACTAGTCATAAGGTATTGCGGCAAATATTGGATTCAGGGAAGTCTCTTCCCTTCCCAGATGGTCTCCTTGTAAATGG
CCAAAAGCAGTCAACTTTCACTGGGGATCAAGGCAAAACATATATGTTCAGGATTTCAAATGTGGGTTTGAAAACTACCATTAACTTCAGAATTC
AGGGCCACAAGATGAAGCTGGTAGAGGTTGAAGGATCACATGTCATTCACAATTTATACGATTCTTTTGATGTCCATGTTGGTCAATCATTATCT
ATCCTTGTCACATTGGATCAATCTCCAAAGGACTACTACATTGTTGCATCTACAAGGTTCACGACAACTGTTCTTACTTCCACCTCAGTGCTCCA
CTA
CTCAACTTGATTAATAAGTTGGATGAGCCCCTTCTTTTGACATGGAACGGAATCAAACAGAGAAAGAACTCTTGGCAAGACGGTGTTTTGGGGAC
AAATTGTCCTATTCCTCCAAACAGAAATTACATTTACAAGTTTCAACCTAAAGATCAGATTGGGAGCTATAATTATTTTCCTTCAACTCAACTGC
ACAGAGCTGCTGGAGGTTTTGGAGTGCTTAATGTTTATGCGAGATCTGTAATCCCCGTTCCATATGCAAAACCTGCTGGAGATTTCAGTTTGCTT
ATTGGTGATTGGTACAAGACTAGTCATAAGGTATTGCGGCAAATATTGGATTCAGGGAAGTCTCTTCCCTTCCCAGATGGTCTCCTTGTAAATGG
CCAAAAGCAGTCAACTTTCACTGGGGATCAAGGCAAAACATATATGTTCAGGATTTCAAATGTGGGTTTGAAAACTACCATTAACTTCAGAATTC
AGGGCCACAAGATGAAGCTGGTAGAGGTTGAAGGATCACATGTCATTCACAATTTATACGATTCTTTTGATGTCCATGTTGGTCAATCATTATCT
ATCCTTGTCACATTGGATCAATCTCCAAAGGACTACTACATTGTTGCATCTACAAGGTTCACGACAACTGTTCTTACTTCCACCTCAGTGCTCCA
CTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546603] | SGN-U568742 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347478 [Download][View] | Facility Assigned ID: TUS70A21_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
