EST details — SGN-E546800

Search information 
Request: 546800Match: SGN-E546800
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194258Clone name: TUS-70-F16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106103 [cLPP-1-N19] Trace: SGN-T174668 EST: SGN-E362607 Direction: 5' Facility: TIGR
Clone: SGN-C194258 [TUS-70-F16] Trace: SGN-T347676 EST: SGN-E546801 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E546800Length: 657 bp (894 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E546800 [] (trimmed) CTGTTAGAAACCCCCACTTAATATTTATAAATAATTTANTTCGAAACCTAATAAGCTGTCTTTTCTAGAATCCAAAACCTAAAACTCAAAAGAAG
CTTAATAACGTCCTAGTTATGCATGCCATTTTCAATCTCATAGCCATAAACTCCAATTTTTAGAAATATAAACTTGCAGCAGTATCTTACAACTT
CTCCAGAAAAACATTCATTGAATGGCAATGTCATCAAAGAATAATAGAATGCAATTCCTATCTCTATGAGCTGCTAATCATTCACAAGGAAAAGA
AAGTATTGAGAACCCACTCCTCCAGCCACGACGATCCTACAACTTCAAATGCTGCAGCAATAGCCACGTCATCAATGCAGGAAGAACGAAAACTT
CAACGAATTAGACCACTTCTTTCTCCCTGTCTTTCATATAGTGTTCTGTACTAATCTGTACAACCCGATTATGTTATCTCCCAGTGGCCTTTATG
GTCTCCGCTTTCATTTCTCACATCGATCTACCCCACCACCTATGGTTTTTATCCGGCTGTCTGTTTCTTTACACTCATCAACACCCTGTCGTCTG
CCAACTTCCTCGTCAAAGTTCTTCATTTTGTGCATATCTGAATTTGTAGTAGCCCCACCCAAGTAAGATAAGGGTGTTGAAGCTTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E546800] SGN-U566995 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T347675 [Download][View] Facility Assigned ID: TUS70F16_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0050 Quality Trim Threshold: 14.5