EST details — SGN-E546855

Search information 
Request: 546855Match: SGN-E546855
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194290Clone name: TUS-70-G24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106783 [cLPP-3-D7] Trace: SGN-T175471 EST: SGN-E363640 Direction: 5' Facility: TIGR
Clone: SGN-C194290 [TUS-70-G24] Trace: SGN-T347731 EST: SGN-E546856 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E546855Length: 828 bp (876 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E546855 [] (trimmed) GAGAAACAACATTAAATAAAATTTAACATAGTACAATTCAAGCAATTCCCCTAAAAAGTGAAAAGTAATTAGGACAAACTAATCCTGATTAATAT
ACAATCTACATCATAATATAGGCCAATTCCACCTCCTCTTGTGTACTAATATACCATATTATGAAAGAAAAATCAATTAATTTAATGGTAATTAG
TAGATTTTGAGGTAAAAATAATAAATATTATTTTTGATGCAAATTAATTATTCAAGACATGCATTTGAAGCCAGGGCAAACTGATAAAATGATAA
TGAGAATCAAAGCTATGATTATCCCTAACACAATTAGTTTAATCTTCATATTTTCATACCATAACTTCCTTCTTATCTTGGTTCCCTGTTGCCTA
AAATCTTGAGCCTGTGATCGAAGATTTTCTGTTTTATCAACTAGAAGTTCAATCTTCTCACCACGATCAAGAACCTTTTCAATGTTTTGCATCAT
CACTCCCTTAACTTCTGAAACTTGAGCTTTCACCTTAGCAAGTTTGTTAATTTCTTCAGGATTATCAACACAATATTTCATTTGCTCTTTCATTT
TTGGCCCAAATTCTTTGCTTAGACTTTTAGGAGCAGCAGTAGTAGCTTTTCCTCCACCATATTTCTTGCTAAAATCATCTTTAATACGTTCCAAA
AACGCAATGGGAAGTTGCCTGCCTGCTGATTCAGTAGCAACCACACAATAGGTAAATCCATTCTCCGCGAGAAAATTGAAAGTGTGTCCATCACA
ATTGTAGGTGAACCTATTGTTGGATGCAGGTTATTTCTGGAAGCATTGCGAGGCAATGCTATTGAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E546855] SGN-U572423 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T347730 [Download][View] Facility Assigned ID: TUS70G24_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5