EST details — SGN-E546866
| Search information |
| Request: 546866 | Match: SGN-E546866 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194296 | Clone name: TUS-70-H6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C106871 [cLPP-3-I20] | Trace: SGN-T175441 | EST: SGN-E363610 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194296 [TUS-70-H6] | Trace: SGN-T347740 | EST: SGN-E546865 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546866 | Length: 748 bp (852 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546866 [] (trimmed)
GATTTTCTGAGAAATAATTTCTAATGGCCGCTCCACCCGCTAGAGCTCGAGCTGATTACGATTACCTCATCAAACTCCTTTTGATCGGCGACAGC
GGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGTATTGACTTCAAGATAAGGAC
CATAGAGCTTGACAGTAAACGCATCAAATTGCAAATCTGGGATACTGCTGGTCAGGAGCGGTTCCGAACAATTACAACTGCTTACTACCGTGGAG
CCATGGGTATATTGCTGGTGTACGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACATTGAACAGCATGCTTCCGAC
AATGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGTCAAGCACTTGCTGATGAATA
TGGCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGATATAAAACAAAGGCTTGCCG
AATCTGACTCAAAGGCTGAGCCTCAGACCATCAGGATAAATCAACCGGACCAGGGAGCAGGATCTTCACAAGGCGCTCAAAATCAGCTTGCTGTG
GTTCTTAAATATCGATTAACAGCAATGAAGCCAGGATGATGGGGAAATCATCCTTAAAATGCCCTTTTAGTGGAAGGGCTGAA
GGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGTATTGACTTCAAGATAAGGAC
CATAGAGCTTGACAGTAAACGCATCAAATTGCAAATCTGGGATACTGCTGGTCAGGAGCGGTTCCGAACAATTACAACTGCTTACTACCGTGGAG
CCATGGGTATATTGCTGGTGTACGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACATTGAACAGCATGCTTCCGAC
AATGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGTCAAGCACTTGCTGATGAATA
TGGCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGATATAAAACAAAGGCTTGCCG
AATCTGACTCAAAGGCTGAGCCTCAGACCATCAGGATAAATCAACCGGACCAGGGAGCAGGATCTTCACAAGGCGCTCAAAATCAGCTTGCTGTG
GTTCTTAAATATCGATTAACAGCAATGAAGCCAGGATGATGGGGAAATCATCCTTAAAATGCCCTTTTAGTGGAAGGGCTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546866] | SGN-U578937 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347741 [Download][View] | Facility Assigned ID: TUS70H06_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
