EST details — SGN-E546923
| Search information |
| Request: 546923 | Match: SGN-E546923 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194329 | Clone name: TUS-70-I15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C107172 [cLPP-4-I1] | Trace: SGN-T175700 | EST: SGN-E363263 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194329 [TUS-70-I15] | Trace: SGN-T347797 | EST: SGN-E546922 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546923 | Length: 234 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546923 [] (trimmed)
CAACATCCAGGTGTATCCAAACTCATGGGCAGCAATAATGTTGACATTTGACAATGCAGGAATGTGGAACTTGAGGTCAGAGATGTGGGAGAAGA
CTTATTTGGGAGAGCAAATGTACTTCAGCGTTCTCTTTCTATCTAATAATAAAGGGGACGGCTTAACTATTAATGGATTCCATGTATTTGTTTTC
CTTCCCCCAAAAAATCAATGAATAAAAAGTTTTTTCTTTCATTC
CTTATTTGGGAGAGCAAATGTACTTCAGCGTTCTCTTTCTATCTAATAATAAAGGGGACGGCTTAACTATTAATGGATTCCATGTATTTGTTTTC
CTTCCCCCAAAAAATCAATGAATAAAAAGTTTTTTCTTTCATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546923] | SGN-U580547 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347798 [Download][View] | Facility Assigned ID: TUS70I15_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.937 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |
Working
