EST details — SGN-E546995

Search information 
Request: 546995Match: SGN-E546995
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194371Clone name: TUS-70-K9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C107498 [cLPP-5-L21] Trace: SGN-T172815 EST: SGN-E359625 Direction: 5' Facility: TIGR
Clone: SGN-C194371 [TUS-70-K9] Trace: SGN-T347869 EST: SGN-E546994 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E546995Length: 741 bp (918 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E546995 [] (trimmed) ATTCTTTCATCTCTCTCTCAAGAAAAAAAGAAAAAAGAAAAAAACAAAAAACTCGAGAGAGAGAGAAAGAATGGGAGCATGCGCAAGCAAGCCTA
ATGTGTTAAATGGTGATGCTCCTGAAGACGCACTAGACAAGGAAGAATTGGTGAACAAGGAAGATATTGTCATTGTCGATGATGCTGATGCCAAC
CATACCCCATCCAATGAAGAAGGAAAGGGGTCAATAGAAGAGACATTAGTAAAAGGTAATGAAGTTGAGAAGGTTGTTGATGATCAAGAGAAGAA
AATAGAACATGTGAAATCACAAAATCCATCTATGGAGAGTGAAGATGAAGAGAAATTACCAGAAGAAGAAGCTCCTGCAACAAACACTACTATAG
AGGAAGTAAAAGTTGCCTTTGAGGATAACAAAATTGAAGACAATGTAACTGTTACGGAGGATCTTGATTCTGATGCTCAGAAAAATAAAACAGAC
GAGAAGCCAATAGTAGTTGCGGAGAATCTAAACTCTGATGATCAGAAAAACAAAGCAGACAACAAACCAGTTGCCACAAAGAAAGGAAAGTTTTG
GTGGGACAAGTAAACTATCATTTTTAATTTCACAACTCATTTTTTCATCAACAAATTGTCATTAATTTCATTTTGTACTCTTCAATCTTATTCTC
ATTAATTTAATTCGATTGTGATCAAATTTATATGATTCATTCTGCTTCTTCATTATAGAATTGTCACCTCCGTATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E546995] SGN-U581939 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T347870 [Download][View] Facility Assigned ID: TUS70K09_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.929 Expected Error Rate: 0.0023 Quality Trim Threshold: 12.5