EST details — SGN-E547104

Search information 
Request: 547104Match: SGN-E547104
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194435Clone name: TUS-70-N1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C107991 [cLPP-7-H23] Trace: SGN-T173064 EST: SGN-E360661 Direction: 5' Facility: TIGR
Clone: SGN-C194435 [TUS-70-N1] Trace: SGN-T347980 EST: SGN-E547105 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E547104Length: 681 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E547104 [] (trimmed) AAAAAAAAAATGAAGGTTTCTACAAGACATATTATACAAAACTGGTCTCAACCAGATGTGAAAAATGGTTACTAAATGTCATACATACATACCAA
GATCAAAAGAATTTTAATATACAGCTTGGTAAAATTGTTGGTTCATGAAATGACATGAGATGCTGCTATTATATCCACAATACTACTTACAAAAC
GACGCAGCATCTACGTTTAATAAACGAGGCTCGTTGGCTCGTTGCAGCTGGAAGCTTTCATGACAGGAACCAATATTCGCATGTGACAATATTAA
ACCCGATCCATTGGTGCAGGCACAGACGAAGAGTCCGTTGATGCAGGAACAGATGGTGTAGCTGATGCCATGGCAAACTGTACACCTGTTGGCTG
CCCAGATTGTACCACAAATGCAAATTGTGCTGTTGCTAATGCTGCAGCTTCCTCTCTTTGCCTGCGCTGCTGCAAAATGCTGATGGCCCAGACCA
TGATGTAGCAAGGTAAAAGAAAGCCAATTAACCGAAGCAAGAAAAGCGAGAAGAAAGCAGAGGGATCTTCGTCATCTCCATCTGCATCTGCTACA
GGTAATGCATGTCGCAAGAGCAGAAAAGCCATTAAAATTAGAGCAGCAGAACGGCAGAACGCAACACCACTTGCNATTGTAGCATTATAATCATC
ATATTCAGCTTCCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547104] SGN-U573344 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T347979 [Download][View] Facility Assigned ID: TUS70N01_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0069 Quality Trim Threshold: 14.5