EST details — SGN-E547157
Search information |
Request: 547157 | Match: SGN-E547157 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C194466 | Clone name: TUS-70-O8 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C108255 [cLPP-8-F7] | Trace: SGN-T172398 | EST: SGN-E360522 | Direction: 5' | Facility: TIGR |
Clone: SGN-C194466 [TUS-70-O8] | Trace: SGN-T348033 | EST: SGN-E547158 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E547157 | Length: 451 bp (884 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547157 [] (trimmed)
TTTTGAAATCTACAGTGAGCCTGGGTCAACTGGGACGGCTACATGAGGAATTCTGTAGGTGGTGTCACAGTAGTCCCTGGACTTCTGGAGAATGT
TCTAATGGTTGACTCCTGGCTCAGTGGCGACGTGACAGGACAAAACAATTTTCCCTATAGTGATGGCCCAAACATGTAGGTCATGAACATCTTTT
ACTCCTGCTAAAGATTTTAGGCCATTCTCGAGTTGAACGATATCAACTTCCTTTGGTGTCCTCTCCATCAATAAGGAAAATATAGTCTTAAGCAT
GGGTACAGTTGTACTAAGAGCAAAGATTGAGAAAAAAATAGTACAGAGAAGATCAACCACCAACCATTCTGGTTTGTACCACATAATAGCTCCAG
CAATCATCACACCAACAGATTGTATTAAATCAGATATAACATGCGGGTAAGCCCCTTCAATATTTATGTTT
TCTAATGGTTGACTCCTGGCTCAGTGGCGACGTGACAGGACAAAACAATTTTCCCTATAGTGATGGCCCAAACATGTAGGTCATGAACATCTTTT
ACTCCTGCTAAAGATTTTAGGCCATTCTCGAGTTGAACGATATCAACTTCCTTTGGTGTCCTCTCCATCAATAAGGAAAATATAGTCTTAAGCAT
GGGTACAGTTGTACTAAGAGCAAAGATTGAGAAAAAAATAGTACAGAGAAGATCAACCACCAACCATTCTGGTTTGTACCACATAATAGCTCCAG
CAATCATCACACCAACAGATTGTATTAAATCAGATATAACATGCGGGTAAGCCCCTTCAATATTTATGTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E547157] | SGN-U589205 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T348032 [Download][View] | Facility Assigned ID: TUS70O08_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.958 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 20.5 |