EST details — SGN-E547297
| Search information |
| Request: 547297 | Match: SGN-E547297 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194547 | Clone name: TUS-71-B17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C103463 [cLPP-10-N6] | Trace: SGN-T176174 | EST: SGN-E362418 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194547 [TUS-71-B17] | Trace: SGN-T348171 | EST: SGN-E547296 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547297 | Length: 819 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E547297 [] (trimmed)
GTATCTGCGTAACATATTCTAACGCAGATCGTGACAAAGACTTTTATAAAAATGTCTTCGTCATCGAACGAGGACTCTCCATCATCAAATTCATC
ATCATCTCCACCAAATAATTCAAATAACAATTCACCACCCAAAAAAGATAATAGCTCTTCTTCTAATGGTAATGATAATGGTAATAATAATAGTA
GTAATAATAATAATAATAACAACAACAATAACAATAATTCAAACTCTCAATCTCCACCTTCTAACAACGATTCATCCTCTGGAAAAGATAATAAC
TCCTCTTCTTCAAATAACAATAACAACAACAACAATAGTAACAACAACAATAACAATAATAATTCAAACTCTCAATCTCCTCCTTCTAATAACAA
TAATTCGTCATCCGGAAAAGATAACAACTCTTCTTCGAATAATAACAACAATGGTAACAACAATAATGGTAATAACAACAATAATGGTAATAACA
ACAATGGTAACAACAATAATGATAATAACAACAATGGTAACAACAATGATAATGACGATGACAATAACAATAACAACGATAACAAGTCACGTTCT
CCACCAAACTCATCAAAAGGAGGATCATCGCTGCCTCCTCCAGTTTCTCCACCATCACATTTTTCTCCAAACTCGAGACCTCTTGCCCCTCCAAA
GCCTCAATCAGATAAGTCAGACAGTAACGATAACAAAACAGCACTCAGGATCGGAGTCGCAGCTGGAGCAGGGATATTATTTATTGTCATGGCTA
GTTTCCTCATCTCTTGTTGTAAGCGGAAAAAGAAAGAAAGCATGATCAAATGGGCTACT
ATCATCTCCACCAAATAATTCAAATAACAATTCACCACCCAAAAAAGATAATAGCTCTTCTTCTAATGGTAATGATAATGGTAATAATAATAGTA
GTAATAATAATAATAATAACAACAACAATAACAATAATTCAAACTCTCAATCTCCACCTTCTAACAACGATTCATCCTCTGGAAAAGATAATAAC
TCCTCTTCTTCAAATAACAATAACAACAACAACAATAGTAACAACAACAATAACAATAATAATTCAAACTCTCAATCTCCTCCTTCTAATAACAA
TAATTCGTCATCCGGAAAAGATAACAACTCTTCTTCGAATAATAACAACAATGGTAACAACAATAATGGTAATAACAACAATAATGGTAATAACA
ACAATGGTAACAACAATAATGATAATAACAACAATGGTAACAACAATGATAATGACGATGACAATAACAATAACAACGATAACAAGTCACGTTCT
CCACCAAACTCATCAAAAGGAGGATCATCGCTGCCTCCTCCAGTTTCTCCACCATCACATTTTTCTCCAAACTCGAGACCTCTTGCCCCTCCAAA
GCCTCAATCAGATAAGTCAGACAGTAACGATAACAAAACAGCACTCAGGATCGGAGTCGCAGCTGGAGCAGGGATATTATTTATTGTCATGGCTA
GTTTCCTCATCTCTTGTTGTAAGCGGAAAAAGAAAGAAAGCATGATCAAATGGGCTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547297] | SGN-U576509 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348172 [Download][View] | Facility Assigned ID: TUS71B17_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.926 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
