EST details — SGN-E547408

Search information 
Request: 547408Match: SGN-E547408
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194612Clone name: TUS-71-E10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C103966 [cLPP-12-I19] Trace: SGN-T174825 EST: SGN-E361626 Direction: 5' Facility: TIGR
Clone: SGN-C194612 [TUS-71-E10] Trace: SGN-T348284 EST: SGN-E547409 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E547408Length: 787 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E547408 [] (trimmed) GATCGTCAATGTTTCTCATATCATTTTATTGACTGATAAATCGATACCAATGGATATTGTTGATTAAAGTAACTAGTAAATTACAACACCATAGT
ACATCAAAAGAAAAATGAGAAAAAGAAATGGAAATATTTTCTCCAATGCATAAAATGGCATATGAAGACAACCCGAATTTTCACTAGGTGGAAAC
AATTATCTAGTGACCGGTTGGCTATATGAATCATCATTTCTTTTTCTTCGAATCTTTTGGATTCTCTCACATCTATCTACTATTAATTAAAAAAA
AAAAGCAAACCGTTTTTCTTCTTTTTTTTTTAATTACCGAAAATAAGAGAAATTAAACCTAAAAGTCAATGATAGGTTCACCAATTGTGAGATTT
CTCTCCAATGACCATGGTAAATTGAAGAGTTTAGCAGTGATGAACTTGAATATCTTGTTCACATTAATGTTGTATGTTGCACTTGAGAAAAATAA
TGGTGCATTTAGTGCCTTTGCATATGCTCTTGCCTGACTTGCAATTGTCCATTGAAGATCCAATGGCAATTTCACAAAATCATCAAACTTTGTCC
CTATCATTACAGGAGTTGCTGTCTGATTCCATTGACGTGCTTGTTGATGCCAGCTAAGGACACTACTGAGTGTACATCTACTTGTGAGATCAAAC
ATGAAAAACATTGCTACAGAATCCTTACAAGCCATTGGAATTTGAGTTGGGCCAGAAACATCACCTTTAACTTCCCACATGCTATATGAGATTCT
TGTCCCTTTCCACATAAAGGTTTGTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547408] SGN-U564362 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348283 [Download][View] Facility Assigned ID: TUS71E10_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5