EST details — SGN-E547522
| Search information |
| Request: 547522 | Match: SGN-E547522 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194678 | Clone name: TUS-71-H4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C104539 [cLPP-14-H22] | Trace: SGN-T174464 | EST: SGN-E360258 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E547522 | Length: 790 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E547522 [] (trimmed)
GGGCTTCTTCTCTCTCCCATTTTGTTTAAAAATCTGTATTAATAGGGAGGCGGTGGAAGTTCATTTAGTTGTTTGATTACGCACTTTTTCAGTGT
TTTCTAGTGGTAATTGAGAAGAGATAATCCTAGGAATGCTGAAAAATGTGTTTGAGTGTCTCGAATTCTAAAAGTGATCATCTCGAGGCTTTGGG
CTTAGTAGAGTTGCCAATTTTCGTTCTTGAGAATATTGAGCCTAGGTGCAACAACCATAGCATCATTGCTTGCGCCAAGATGCAAAGTCCATGGA
GTAGCTGTACATTGTGTGTTGTGTTAATAAACGATAATTTGTGCGCGGATGGTTGAGTGGCTGTAGTTTATAAGGTTTTGCATCTAAGTTTGTAT
GTACTAGAAAGAGATATATAGATAGATTTTTTTTAATGGCCAATAAAGGAAGCATACTGATGGAGCGGTATGAAGTGGGCAGATTATTAGGTCAA
GGTACATTTGCTAAGGTTTACTATGCGAGGAATATCAAAACCGGACAGAGTGTTGCCATCAAAGTCATAGACAAGGAAAAAGTTGTCAGGGTCGG
GCTCATGAATCAGATCAAACGGGAGATATCTGTTATGAAACTAGTCAGACATCCAAATATTGTGCATCTTTACGAGGTCATGGCGACAAAAACCA
AGATATACTTTATCATGGAGTATTGTAAAGGAGGTGAGCTCTTTAACAAGGTAGCTAAGGGAAGGCTGAAAGAGGACGCAGCACGGAAATATTTT
CAGCAGTTGATAAATGCTGTAGATTTCTGC
TTTCTAGTGGTAATTGAGAAGAGATAATCCTAGGAATGCTGAAAAATGTGTTTGAGTGTCTCGAATTCTAAAAGTGATCATCTCGAGGCTTTGGG
CTTAGTAGAGTTGCCAATTTTCGTTCTTGAGAATATTGAGCCTAGGTGCAACAACCATAGCATCATTGCTTGCGCCAAGATGCAAAGTCCATGGA
GTAGCTGTACATTGTGTGTTGTGTTAATAAACGATAATTTGTGCGCGGATGGTTGAGTGGCTGTAGTTTATAAGGTTTTGCATCTAAGTTTGTAT
GTACTAGAAAGAGATATATAGATAGATTTTTTTTAATGGCCAATAAAGGAAGCATACTGATGGAGCGGTATGAAGTGGGCAGATTATTAGGTCAA
GGTACATTTGCTAAGGTTTACTATGCGAGGAATATCAAAACCGGACAGAGTGTTGCCATCAAAGTCATAGACAAGGAAAAAGTTGTCAGGGTCGG
GCTCATGAATCAGATCAAACGGGAGATATCTGTTATGAAACTAGTCAGACATCCAAATATTGTGCATCTTTACGAGGTCATGGCGACAAAAACCA
AGATATACTTTATCATGGAGTATTGTAAAGGAGGTGAGCTCTTTAACAAGGTAGCTAAGGGAAGGCTGAAAGAGGACGCAGCACGGAAATATTTT
CAGCAGTTGATAAATGCTGTAGATTTCTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547522] | SGN-U574753 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348397 [Download][View] | Facility Assigned ID: TUS71H04_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |
Working
