EST details — SGN-E547568
| Search information |
| Request: 547568 | Match: SGN-E547568 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194705 | Clone name: TUS-71-I7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C104741 [cLPP-15-L17] | Trace: SGN-T176239 | EST: SGN-E361263 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194705 [TUS-71-I7] | Trace: SGN-T350432 | EST: SGN-E549557 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547568 | Length: 842 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547568 [] (trimmed)
ATGAAAATTCTTCTTCATATAAAAAAAACACATACAAATATCCACAAAAACAAATATGTTGGCTTTCTTCTAAGTATCAAAACACAAAACTTGTA
CCATCATCAGTTCATCACCAACAAAAAAACAACGAAAACATATCGCGATGTCTCGCTGCCATTACAACTGAAATAGTACTCTCGGAGTATGACAG
AAACCAAACAAAATTTACTCGAACGTCTCATTTTCTACTATCGTTCACATAACATGTATCCGATTGCTCCTGCAAGTGCAATTTGCTGGGGAAAA
AAAGACATCCTAGTTTTATCTTCCTACAAGAACTGAGAAGAGAGAACGGAACGTTATAAACATACTAGAACACTCTGCAGTTAATTCAAGTAGGG
GTATCCTCTGCGCTCCCATCCTGTACGTCTTTCTGCAACTTTTGGCGCTGGCACCAACACGAGAACTGAGGGATGGGGCCTTCATCTCCTAGGAA
CCACTCGTGTTGACAAACACTTTCGAGAGTTAGCCTTTGTGTTGGATCTTTGCAGAGAAGCCCCTCTAATAAATTCTTCAGTAGCGGATTCATAT
CGTCGGGGAGAATGATGGGGTTATTTACTATCTTGTCATATGTATCCTGGAGAGTTTCTCCTAGAAACGGGTATTTTCCCAAGATCATGCAATAA
AGGGTAACACCAACCGCCCACGTGTCAGCACATTTTCCATGATATCTATCTCCTACGCAGCATTCAGGAGCAGTGAAAACAGGAGTGCCAGGAGA
TCGACGGAGTTTATCATTATCATCCTCAAAAACTTGGCTGACGCTGAAATCACCAATCTTCACCTTACCAGCAGCAGTCACT
CCATCATCAGTTCATCACCAACAAAAAAACAACGAAAACATATCGCGATGTCTCGCTGCCATTACAACTGAAATAGTACTCTCGGAGTATGACAG
AAACCAAACAAAATTTACTCGAACGTCTCATTTTCTACTATCGTTCACATAACATGTATCCGATTGCTCCTGCAAGTGCAATTTGCTGGGGAAAA
AAAGACATCCTAGTTTTATCTTCCTACAAGAACTGAGAAGAGAGAACGGAACGTTATAAACATACTAGAACACTCTGCAGTTAATTCAAGTAGGG
GTATCCTCTGCGCTCCCATCCTGTACGTCTTTCTGCAACTTTTGGCGCTGGCACCAACACGAGAACTGAGGGATGGGGCCTTCATCTCCTAGGAA
CCACTCGTGTTGACAAACACTTTCGAGAGTTAGCCTTTGTGTTGGATCTTTGCAGAGAAGCCCCTCTAATAAATTCTTCAGTAGCGGATTCATAT
CGTCGGGGAGAATGATGGGGTTATTTACTATCTTGTCATATGTATCCTGGAGAGTTTCTCCTAGAAACGGGTATTTTCCCAAGATCATGCAATAA
AGGGTAACACCAACCGCCCACGTGTCAGCACATTTTCCATGATATCTATCTCCTACGCAGCATTCAGGAGCAGTGAAAACAGGAGTGCCAGGAGA
TCGACGGAGTTTATCATTATCATCCTCAAAAACTTGGCTGACGCTGAAATCACCAATCTTCACCTTACCAGCAGCAGTCACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547568] | SGN-U569102 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348443 [Download][View] | Facility Assigned ID: TUS71I07_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0007 | Quality Trim Threshold: 20.5 |
Working
