EST details — SGN-E547733

Search information 
Request: 547733Match: SGN-E547733
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194801Clone name: TUS-71-M7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C105437 [cLPP-18-C1] Trace: SGN-T177228 EST: SGN-E364587 Direction: 5' Facility: TIGR
Clone: SGN-C194801 [TUS-71-M7] Trace: SGN-T350459 EST: SGN-E549584 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E547733Length: 658 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E547733 [] (trimmed) GGTCCTTCATTCTCCCACCAAAAAAAAGAAGAAAATAATCATCTTCCATGGGAGAATCTACGAAATCACCATCGTCTGCGTCAAAATATTATGGA
ATATTAGAAATTCCAAAATCAGCATCCCTTAAAGACATTTGCAAAGCGTACAAGCATCTTGTTAAGAAATGGCATCCTGATAGAAATAAATCCAA
TCAAGCTGAAGCTGTAGACAAGTTTCGATCCATCAATGAAGCCTATAGAGTTCTTAGCAAGAAAAAGAGAGAGGAAGCAGATTTATTTAAGAGCG
ATACGGCAAAAACACCTAAAAAAAGTTCAAAAGATGAGGAGGATGAGTTACAAATTTCAAGTCCTACACTTCTTTCAAGAACAACAAGTCGAATC
AGCCCAACAGTAGATTTTTACACGTCGATGCCAGCATGTTTTACCATGAGTGGAACCAACACTCCCACAACCCCTGGCACCCCTGTATCAGATCA
ACCTCCAAATAACCTTTCCAAAGTTGCTAGTAAGCCTATCATTTTTTCTCAATCTACTTCTCGGAGAAAAACTCAACCAATTGAGAAGAAATTGG
AATGTACACTCGAGGAATTGTGCAATGGATGCGTCAAGAAGGTCATAATAACAAGAGATGTTGTTGNCACAACAGGGCTAATTGTTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547733] SGN-U577027 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348608 [Download][View] Facility Assigned ID: TUS71M07_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0092 Quality Trim Threshold: 14.5