EST details — SGN-E547733
Search information |
Request: 547733 | Match: SGN-E547733 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C194801 | Clone name: TUS-71-M7 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C105437 [cLPP-18-C1] | Trace: SGN-T177228 | EST: SGN-E364587 | Direction: 5' | Facility: TIGR |
Clone: SGN-C194801 [TUS-71-M7] | Trace: SGN-T350459 | EST: SGN-E549584 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E547733 | Length: 658 bp (900 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E547733 [] (trimmed)
GGTCCTTCATTCTCCCACCAAAAAAAAGAAGAAAATAATCATCTTCCATGGGAGAATCTACGAAATCACCATCGTCTGCGTCAAAATATTATGGA
ATATTAGAAATTCCAAAATCAGCATCCCTTAAAGACATTTGCAAAGCGTACAAGCATCTTGTTAAGAAATGGCATCCTGATAGAAATAAATCCAA
TCAAGCTGAAGCTGTAGACAAGTTTCGATCCATCAATGAAGCCTATAGAGTTCTTAGCAAGAAAAAGAGAGAGGAAGCAGATTTATTTAAGAGCG
ATACGGCAAAAACACCTAAAAAAAGTTCAAAAGATGAGGAGGATGAGTTACAAATTTCAAGTCCTACACTTCTTTCAAGAACAACAAGTCGAATC
AGCCCAACAGTAGATTTTTACACGTCGATGCCAGCATGTTTTACCATGAGTGGAACCAACACTCCCACAACCCCTGGCACCCCTGTATCAGATCA
ACCTCCAAATAACCTTTCCAAAGTTGCTAGTAAGCCTATCATTTTTTCTCAATCTACTTCTCGGAGAAAAACTCAACCAATTGAGAAGAAATTGG
AATGTACACTCGAGGAATTGTGCAATGGATGCGTCAAGAAGGTCATAATAACAAGAGATGTTGTTGNCACAACAGGGCTAATTGTTAA
ATATTAGAAATTCCAAAATCAGCATCCCTTAAAGACATTTGCAAAGCGTACAAGCATCTTGTTAAGAAATGGCATCCTGATAGAAATAAATCCAA
TCAAGCTGAAGCTGTAGACAAGTTTCGATCCATCAATGAAGCCTATAGAGTTCTTAGCAAGAAAAAGAGAGAGGAAGCAGATTTATTTAAGAGCG
ATACGGCAAAAACACCTAAAAAAAGTTCAAAAGATGAGGAGGATGAGTTACAAATTTCAAGTCCTACACTTCTTTCAAGAACAACAAGTCGAATC
AGCCCAACAGTAGATTTTTACACGTCGATGCCAGCATGTTTTACCATGAGTGGAACCAACACTCCCACAACCCCTGGCACCCCTGTATCAGATCA
ACCTCCAAATAACCTTTCCAAAGTTGCTAGTAAGCCTATCATTTTTTCTCAATCTACTTCTCGGAGAAAAACTCAACCAATTGAGAAGAAATTGG
AATGTACACTCGAGGAATTGTGCAATGGATGCGTCAAGAAGGTCATAATAACAAGAGATGTTGTTGNCACAACAGGGCTAATTGTTAA
Unigenes |
Current Unigene builds | |||||
[SGN-E547733] | SGN-U577027 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T348608 [Download][View] | Facility Assigned ID: TUS71M07_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 14.5 |