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EST details — SGN-E547838

Search information 
Request: 547838Match: SGN-E547838
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194862Clone name: TUS-71-O20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106280 [cLPP-20-K15] Trace: SGN-T177501 EST: SGN-E364373 Direction: 5' Facility: TIGR
Clone: SGN-C194862 [TUS-71-O20] Trace: SGN-T348712 EST: SGN-E547837 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E547838Length: 751 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E547838 [] (trimmed) GGTTCCGATCTCTCCTTCCGGTTTTGGGAGAGAAGAGAGAAGAGATCAAAGTGATCATGGCAAATAAAATGGATCACGAGTACGATTATTTGTTT
AAGATCGTCGTGATTGGGGATTCTGGAGTGGGGAAATCAAACATTTTATCCAGGTTCACGAGAAATGAGTTCTGTTTGGAGTCCAAATCCACTAT
TGGCGTTGAGTTTGCCACCAGAACTCTTCAGGTGGAGGGGAAAACAGTGAAGGCCCAGATATGGGACACTGCAGGGCAAGAAAGGTACCGAGCCA
TTACCAGTGCTTATTATCGAGGAGCAGTTGGTGCCCTCCTTGTCTATGACATAACTAAGAGGCAAACTTTTGACAATGTTCTGAGGTGGCTACGG
GAATTGAGAGACCACGCAGACTCTAATATTGTAATCATAATGGCTGGAAACAAGTCTGACCTTAGGCATCTTAGAGCAGTCTCTGAGCAGGATGG
TCAAGCTTTAGCTGAGAAGGAAGGGCTGTCATTTCTTGAGACGTCAGCATTGGAAGCTTTTAATGTTGATAAGGCGTTTCATACTATATTGACAG
ATATATACCAGATCATTAGCAAGAAGGCATTGGCAGCACAGGAAGCAGATAGCACTGCACTTCCTGGTCAGGGTACAACCATCAATGTCAGTGAT
ACCTCCGCAAATGTGAAGAGAGGCTGCTGTTCCACTTGAGTTTATGTTTCAAAAAGGAAATAGCATTTATAGCAAGGCATAAACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547838] SGN-U569326 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348713 [Download][View] Facility Assigned ID: TUS71O20_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0018 Quality Trim Threshold: 14.5