EST details — SGN-E547940
| Search information |
| Request: 547940 | Match: SGN-E547940 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188933 | Clone name: TUS-56-H19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C49176 [cLEI-7-F17] | Trace: SGN-T81179 | EST: SGN-E266954 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E547940 | Length: 807 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E547940 [] (trimmed)
CAAAAATTGAAAGCAAAATTTTTATTCGACTATTGGGGCATTGGTCAGTGAAAAAAACAATCTGTACAGTAAGAATAAATAGGCTAAAAGCATGT
TTAAATTAGGTGTAACTAAAAATATCACTGCATCAATATTCTGTATTTGCATCAACTCAGTGATGCCCACGTCTAAGCGCTGAAAAGAATCCTCC
AGATGCCTTCTCCTTGCAACGATCTGCTTTTTCATGTCCAACCTCTTTTGCTATTTGCTGCAAAATATCGACTATTGCAGAAAAGTCAGGTCTGG
ATGTTGGCTCCCTCATTTTCCTCTCTTTAAAAACCATGGCAGCTGCTACAATGGCTCTTTCTTCTCCTTCTTTTGCCGGACAGGCAGTGAAACTC
TCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACCATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGTCCATGGTATGGCCC
TGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGAC
TCTCAGCAGACCCTGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCT
GAGCTATTGGCCCGTAACGGTGTCAAGTTCGGTGAAGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGAGGACTTGACTACTTGGG
CAACCAAGCTTTGGTCATGCACAGAGCATCTTGGCCATCTGGGCTTG
TTAAATTAGGTGTAACTAAAAATATCACTGCATCAATATTCTGTATTTGCATCAACTCAGTGATGCCCACGTCTAAGCGCTGAAAAGAATCCTCC
AGATGCCTTCTCCTTGCAACGATCTGCTTTTTCATGTCCAACCTCTTTTGCTATTTGCTGCAAAATATCGACTATTGCAGAAAAGTCAGGTCTGG
ATGTTGGCTCCCTCATTTTCCTCTCTTTAAAAACCATGGCAGCTGCTACAATGGCTCTTTCTTCTCCTTCTTTTGCCGGACAGGCAGTGAAACTC
TCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACCATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGTCCATGGTATGGCCC
TGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGAC
TCTCAGCAGACCCTGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCT
GAGCTATTGGCCCGTAACGGTGTCAAGTTCGGTGAAGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGAGGACTTGACTACTTGGG
CAACCAAGCTTTGGTCATGCACAGAGCATCTTGGCCATCTGGGCTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547940] | SGN-U578505 | Tomato 200607 | Build 2 | 231 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348815 [Download][View] | Facility Assigned ID: TUS56H19_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 14.5 |
Working
