EST details — SGN-E547940

Search information 
Request: 547940Match: SGN-E547940
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C188933Clone name: TUS-56-H19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C49176 [cLEI-7-F17] Trace: SGN-T81179 EST: SGN-E266954 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E547940Length: 807 bp (884 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E547940 [] (trimmed) CAAAAATTGAAAGCAAAATTTTTATTCGACTATTGGGGCATTGGTCAGTGAAAAAAACAATCTGTACAGTAAGAATAAATAGGCTAAAAGCATGT
TTAAATTAGGTGTAACTAAAAATATCACTGCATCAATATTCTGTATTTGCATCAACTCAGTGATGCCCACGTCTAAGCGCTGAAAAGAATCCTCC
AGATGCCTTCTCCTTGCAACGATCTGCTTTTTCATGTCCAACCTCTTTTGCTATTTGCTGCAAAATATCGACTATTGCAGAAAAGTCAGGTCTGG
ATGTTGGCTCCCTCATTTTCCTCTCTTTAAAAACCATGGCAGCTGCTACAATGGCTCTTTCTTCTCCTTCTTTTGCCGGACAGGCAGTGAAACTC
TCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACCATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGTCCATGGTATGGCCC
TGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGAC
TCTCAGCAGACCCTGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCT
GAGCTATTGGCCCGTAACGGTGTCAAGTTCGGTGAAGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGAGGACTTGACTACTTGGG
CAACCAAGCTTTGGTCATGCACAGAGCATCTTGGCCATCTGGGCTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547940] SGN-U578505 Tomato 200607 Build 2 231 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348815 [Download][View] Facility Assigned ID: TUS56H19_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5