EST details — SGN-E547948
| Search information |
| Request: 547948 | Match: SGN-E547948 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188961 | Clone name: TUS-56-I23 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C49367 [cLEI-8-A17] | Trace: SGN-T81386 | EST: SGN-E267514 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188961 [TUS-56-I23] | Trace: SGN-T338653 | EST: SGN-E537778 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547948 | Length: 765 bp (887 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E547948 [] (trimmed)
CTCTAAATCTGCAATTGCAGTATTATTTGGCTAATTAAGGCAAGACATTCTTAATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTC
AGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTA
ATCCTTTTTCAGTGACATGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGA
TCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCC
GCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCG
TTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATT
AAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGGGCTTTTCTTAGT
AAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTATTGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTT
CTGAA
AGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTA
ATCCTTTTTCAGTGACATGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGA
TCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCC
GCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCG
TTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATT
AAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGGGCTTTTCTTAGT
AAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTATTGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTT
CTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547948] | SGN-U565541 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348823 [Download][View] | Facility Assigned ID: TUS56I23_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |
Working
