EST details — SGN-E547987

Search information 
Request: 547987Match: SGN-E547987
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189101Clone name: TUS-56-O19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46449 [cLEI-12-J5] Trace: SGN-T82164 EST: SGN-E267745 Direction: 5' Facility: TIGR
Clone: SGN-C189101 [TUS-56-O19] Trace: SGN-T338896 EST: SGN-E538021 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E547987Length: 783 bp (885 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E547987 [] (trimmed) CAGCTCAACAAAAATTTATTACGGGCAGCAAAAAAAATTCAGTTATGCAAAGCAAATGCATGTACAAGATCTCTACAAAAAGTCTAAATAAATCC
CACTCAAACGCATACCCTATCCCCACAACATCAAGAATATAAATAACTGCAACATTGTTCTATTTAATGTCTCATCTCACTCTAACCAGACCAAC
ACGTGAAAATAAATACTAGTCAATTAGCATTTTTTTCATGTTCACCCCAAGCAAATGGGGCAGCGGGGTAATGCTAGCATTTAAGGACGATCACA
ATCTTCCTGCTCCCACATCATAATGCATGGCTGGTCCAGGTGTATGAAATGATCCCAACATGAGGAGAAATATTAGTTCTTCAACTAATGTTACA
AGGAAAATCAGGTAAGCTCAGCAATCAATGGTGTCAATTAACACTAACAGCAGATTTCTTCCATGGAAGCTTTTGCTCATTGGATGAACCATCCA
TAGTTGCAAGTGGCAACAAGTTCCAACTTCTTCAGGAACCGCCACACAGTAGAAGACCACAAATGATTGAACATACAGGAACCCTGCTTTATGCA
TTTTGCTGGACTTGTCGGTGTACTTGCAGAATCCAATCCTGGTAACCAATAGAACCACCAACTGGATCCTCAATCAGATTTGCAAGCAAGAAGAA
GCCTTCTCTAGGCTGTTCACCTTGCCTCACAAGATGGCATAACTGATAATATGATCTGTCACTCTCCCTCTGTCTTTTAAGCAACCCATCAGTTC
TCTTGACATTTCATTATCTAGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547987] SGN-U571604 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348862 [Download][View] Facility Assigned ID: TUS56O19_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0066 Quality Trim Threshold: 14.5