EST details — SGN-E547989
| Search information |
| Request: 547989 | Match: SGN-E547989 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189108 | Clone name: TUS-56-P2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C46500 [cLEI-12-M16] | Trace: SGN-T82284 | EST: SGN-E267865 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189108 [TUS-56-P2] | Trace: SGN-T338908 | EST: SGN-E538033 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547989 | Length: 574 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547989 [] (trimmed)
GATGTTTAAAAAAAATTCTATTATTATTTAAATAGAAGGGTTCATAATATAAACTCGTACGAGGGTCGCGCGACCCTTTTGGCTTTTTTTATTAT
ACTTTCAACACAATATGCATCAACAAAAATAAAAAGGAAATTAAACTTGGCAAATTTACATTTACTGCTGCCATACTTCAATCTGCAAACATGGG
AAAAAAAACATAGCATTTACAACGAATGCGGTTTCAAAGCACCGTAAGTTCTTGGCGCTGGCGCATTCTCATTTTCGTTCTGTTGATTCTGCTTA
TAACTGCCAACGCTACAAGGAACAAATCCCAATGACTTTTCGTCAGGACAAGATCTTGGCTTACAGAAAAATGCAGCACATTCCTCTGCTGATCT
TTGCATTGACAAGCCTGGAATGCAATTCATCTTGATATCAAGTACTCTTTTCTCAATTAACTTCTTGCATACCGGTCCAACTTCATTGAAGTAAT
TGTAACTCAACGTCAAATTTTTCAAGTTTCAGAGCTTGCACACTAGTTCAGGTACAGCTCCGTAAAACTGATTTTGTGCCAAATAAATATCTCTA
TCTT
ACTTTCAACACAATATGCATCAACAAAAATAAAAAGGAAATTAAACTTGGCAAATTTACATTTACTGCTGCCATACTTCAATCTGCAAACATGGG
AAAAAAAACATAGCATTTACAACGAATGCGGTTTCAAAGCACCGTAAGTTCTTGGCGCTGGCGCATTCTCATTTTCGTTCTGTTGATTCTGCTTA
TAACTGCCAACGCTACAAGGAACAAATCCCAATGACTTTTCGTCAGGACAAGATCTTGGCTTACAGAAAAATGCAGCACATTCCTCTGCTGATCT
TTGCATTGACAAGCCTGGAATGCAATTCATCTTGATATCAAGTACTCTTTTCTCAATTAACTTCTTGCATACCGGTCCAACTTCATTGAAGTAAT
TGTAACTCAACGTCAAATTTTTCAAGTTTCAGAGCTTGCACACTAGTTCAGGTACAGCTCCGTAAAACTGATTTTGTGCCAAATAAATATCTCTA
TCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547989] | SGN-U577679 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348864 [Download][View] | Facility Assigned ID: TUS56P02_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0185 | Quality Trim Threshold: 14.5 |
Working
