EST details — SGN-E548157
| Search information |
| Request: 548157 | Match: SGN-E548157 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189751 | Clone name: TUS-58-J21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C73757 [cLER-5-P18] | Trace: SGN-T93260 | EST: SGN-E279751 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E548157 | Length: 625 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548157 [] (trimmed)
ATAAATAGAAGTTTCTATAACATAGTTCTGAGTAAACTGTTGATGAATTTAATTGCTACAACAAGTAATCGTGCGCGCAGGCTGCAAAACCAGTA
AAACAAAATGAGAGACTGGAAGCAGCCAGGGAACTTAACAAACACAACACATGATGACATTGATTTGCTTCTCTCAAAATAACAAAAATAATAAG
ATACAAGTATTGAGAGCATAAGACTAGGAAGCACTGGTGTGGAGGGCCACCAAAGAGGAATAGAAGCCATCTTTGATATTGATAAGAGTATCATG
TTTCCCTTTCTCCACAATTACTCCATTTTTCACCACAGCAATTACATCTGCTCCTTTGATGGTAGATAATCTATGTGCTACCACCACGGTTGTAC
GATTTACCATCACCCGATCAAGTGCATCTTGAACTATTCTCTCTGATTCTGCATCCAATGCGCTTGTCGCCTCATCTAATAGTAGGATTTTTGGA
TTTTTCAATATGGCCCTCGCTATAGCTACTCGTTGCTTCTGCCCACCTGACAGTTGAGTTCCTCGTTCTCCCACTGTCGTATCATAACTCTGTTG
CAGACCACTGATGAACTTGTGGGCGTTTGCTAATTCGGCTGCTGCTAAAACTTCT
AAACAAAATGAGAGACTGGAAGCAGCCAGGGAACTTAACAAACACAACACATGATGACATTGATTTGCTTCTCTCAAAATAACAAAAATAATAAG
ATACAAGTATTGAGAGCATAAGACTAGGAAGCACTGGTGTGGAGGGCCACCAAAGAGGAATAGAAGCCATCTTTGATATTGATAAGAGTATCATG
TTTCCCTTTCTCCACAATTACTCCATTTTTCACCACAGCAATTACATCTGCTCCTTTGATGGTAGATAATCTATGTGCTACCACCACGGTTGTAC
GATTTACCATCACCCGATCAAGTGCATCTTGAACTATTCTCTCTGATTCTGCATCCAATGCGCTTGTCGCCTCATCTAATAGTAGGATTTTTGGA
TTTTTCAATATGGCCCTCGCTATAGCTACTCGTTGCTTCTGCCCACCTGACAGTTGAGTTCCTCGTTCTCCCACTGTCGTATCATAACTCTGTTG
CAGACCACTGATGAACTTGTGGGCGTTTGCTAATTCGGCTGCTGCTAAAACTTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548157] | SGN-U584047 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349032 [Download][View] | Facility Assigned ID: TUS58J21_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0011 | Quality Trim Threshold: 14.5 |
Working
