EST details — SGN-E548178

Search information 
Request: 548178Match: SGN-E548178
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189824Clone name: TUS-58-M22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74481 [cLER-9-L20] Trace: SGN-T94005 EST: SGN-E278271 Direction: 5' Facility: TIGR
Clone: SGN-C189824 [TUS-58-M22] Trace: SGN-T340053 EST: SGN-E539178 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548178Length: 801 bp (902 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E548178 [] (trimmed) TTCAATCGAATTTAGTTTTGCTAAATGCACTTCTTCATTTATATGCTACTTGTGGAGCAACGGATGATGCCATCCTTCTGTTCGATAAAATGCCT
CAACGAGATGTTGTGTCTTGGAATATAATGATTACCCAATTATCAAAGAAGGGTGATGTTGATGGGGCGTTTGACTTGTTTGGGAAAATGCCTGA
GAGAAATTTAAGGTCTTGGACAGCCATGATTACTGGTTTTGTTCATTGCGTGAAGGCTAAAGAGGCTATTAGACTTTTCGTAGAAATGGAAGAAA
CGGGGTTGAGGGCGAATGAGGTAACTGTAGTGGCTGTTCTTGCAGCTTGTGCTGATTTGGGTGCACTTGACTTGGGTAGGAGGATTCATGAGTAT
TCAAATAAGAGCGGGTTCAGGAGAAACGTTCACATTTGTAACACTCTGATTGACATGTACATTAAGTGTGGCTGCTTAGAGGCTGCAAAAGCTGT
TTTCGATGAAATGAAGGAACCAACAATTGTATCATGGTCAGCCATGATCCAGGGTTTAGCTATCCATGGACACGGGGATGAAGCCTTAGAACTCT
TTAACGAGATGATCAAAATGGGAATGAAGCCTAACGAGGTCACGTTTCTTGGAATCTTGCATGCTTGTAGCCATATGGGGTTGATCAATAAGGGG
CGAGAATTCTTTACTAGCATGAGTAGAGACTACAACATTTCTCCCTCAATCGAGCATTATGGTTGTATGGTTGATCTCTTGAGTCGAGCAGGACT
TCTTGAAGACGCGTATGAGCTCATCACAAGCATGCCTATAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548178] SGN-U570202 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349053 [Download][View] Facility Assigned ID: TUS58M22_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5