EST details — SGN-E548179

Search information 
Request: 548179Match: SGN-E548179
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189829Clone name: TUS-58-N3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69428 [cLER-10-F1] Trace: SGN-T94082 EST: SGN-E278655 Direction: 5' Facility: TIGR
Clone: SGN-C189829 [TUS-58-N3] Trace: SGN-T340064 EST: SGN-E539189 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548179Length: 804 bp (849 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548179 [] (trimmed) GGTGATCACAACCTTTTCTTTTTTATTTTGTCACTGAGATTTGGAATCCAAAAATGTACTGTAATCCAATGTATAAGTAACAATATACAGTTGTA
TTTACACATACTATGGTGCAGTGTAGTACAATGTGAGAATCAAAAAAGAGAAATTTCCTTCCCTACCAGTGTAAGCATAAATTCTGAGTCCGCTT
CTCGGGTCAACTCAAGGGCAGTGTGTTGTAGAAATAACTCACACAGAGTCCAAACTCAAAGCTGGAACTACCAATCCGCCAATTTCGTGGTTAGC
AGCTGCATTTTTAGGTCAAGCCAACTAATGAAACCTTGGGAAGTTGTTTCAACAATTTGATAAGCTCATACGTCCTTATATCTCGACCAGAATGG
AGGCATATGTCAAGTGGGGTTAGACCATCCCTGTTCTTTAGAGTCTTGTCAGCTCCCTTAATTAACAAAAGCCTCACTATATCGGTTCTACGGGA
TTGAACAGCTAGATGCAAAGGTGTCCATCCATCATGATCTTGGAGGTTTATATCAACATTATACAAGAGAAGGATTTTTATCATGTGAGTGGATG
CCGTTCGAACAGCATAGTGCATCAAGGTGGCTCCATCTTTGTCAAGTATAAATGGATTTGCAGATTCTCTTAAAAGAAAGTTAAAAATAGCCTGC
TTCTTGCCAAGAATTGCTTTATGGATAGCTGTCAATCCATCCTTATCTGGAACATTAATATCAACAACATGCTTCAACAAAGAGGTGAGAAGGTA
AAACTCTCCTGAGGCAGCTAAAGTATGTACAGGCTGCCATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548179] SGN-U567201 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349054 [Download][View] Facility Assigned ID: TUS58N03_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0014 Quality Trim Threshold: 14.5