EST details — SGN-E548190

Search information 
Request: 548190Match: SGN-E548190
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189866Clone name: TUS-58-O16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69854 [cLER-12-M7] Trace: SGN-T94477 EST: SGN-E283510 Direction: 5' Facility: TIGR
Clone: SGN-C189866 [TUS-58-O16] Trace: SGN-T340125 EST: SGN-E539250 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548190Length: 730 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E548190 [] (trimmed) TCTGTCCAATGAGGAAGATATCCGGGAACACTTCTGTGTAGCCAAAACTAAATTGACAAGTAAATCACACAAGTTTCAGGCTTGAGACAGGTCAC
GACTACCTCGAGTATTTTCTCAAACAAAAACTACATCCACAACCTTCACAAGCTTCGGAATACAACAAATACTTCCCAAAGTTACAACATAAAAT
TGTGCAAGGCATTGTAAAATACTATAGCTCCTATATAAAAATGACATACAAGAACTCCCAGTCTCAAGTCTCTATAGCTTGTCTAAGTGATTTAT
GCTGCAACAGTCTTTGGCTTCGCGCCAATTTTTTTCCAGGAAACACTAGGCATTATCTGCTTTGTGTCGACACGATCCTTATATTGAACAGCAAA
GTTCAATAGAGAGTCGAGAAGAGAATCAGAAAGAAGGTGAGGTTGTAGTCCCAGCTCAATAAGTTTAGTATGTTTGGCATTGTAGTAGTGTTCCT
CTGCTTCTACTCTTGGATTGGGCACTGATATGGCCTTCACCTCAAGGCCAAGTTTTTGCCCTGCCTTGGTGACAAGGGCTGCAAGCTCATTTACT
GAAAACTGCTCTGTGAATTGGTTGAAAACCCGGAACTCTCCTGGTTTTGCTGGATTGGCAATTGCAATTTCAACACATTGAACTGTATCTCTGAT
ATCCAAATATCCCCTGGTCTGCCCTCCTTTACATACACCGTTAGTGGATGTCAACAGCAGCCTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548190] SGN-U580292 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349065 [Download][View] Facility Assigned ID: TUS58O16_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5