EST details — SGN-E548281

Search information 
Request: 548281Match: SGN-E548281
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190190Clone name: TUS-59-M4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77946 [cLES-3-M6] Trace: SGN-T97552 EST: SGN-E284531 Direction: 5' Facility: TIGR
Clone: SGN-C190190 [TUS-59-M4] Trace: SGN-T340684 EST: SGN-E539809 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E548281Length: 808 bp (860 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548281 [] (trimmed) AAGGTTCAACAACAAAAAAATAAAGAGTTACAACTTATAATGAACCGAAGTAATTAAAATACTACAGAAAATAGTTTCACATCTGAGTACATCCC
CAAGGACATAAAGAGCTCTCCTCTTAATTCTGTTAAGCCCTCAACCTCTCACCAAAAATATGAAAAAAACATACCTCTGCTTGTTAGCAGCAGTG
AGTTGTTATACTTTTTTGGGCAGTATGTTGTATCGACGTACAGCAAGCTGGATGAAGATGCTTGAACCTAAACCTAAACCAAAACTTCTAACTAA
ACCACTAGGCTCAAAAAGTTTGACATATGTGTTGGTGCATGAAACTATCTTGTGCTTGAATATATGCACACACACATATTTACGACTATATTCAC
CAAGTCAGATTGAGAAAAGGGAAGCTCTTGTTTCCAGTTTCATTTGTTTTTCAACCCCCTTTTTCTCTTACTGTGACATGGGAATAAGCTGCAGT
TACTGAAGACGGGTTTTAGCAAACCAGTTTCTTTAGTGTAAAATGTTTACATACCCACTGATAGGAAACTCCTGGCTAAAGCAAAAAACATCAGT
TTAGTAATGTGCAGTTTGATGCGTAATCTCTCAGAACAAGCTCCACTTCTCCAACTACCCCAAGTCTCTTGAACCAACGAGCCAATAATTCAGAA
GCTTCTCTGCCAAGCACAATACCATCCCTCTCTAAATCCATCAAAACATCAAGTGCCTTGCTCAGTTTATTTTCTGTTTCATAAGCTGTCAGTAG
CAACGTAATACACTTGTCATTTGGCTTTATGCCAACTCTTCTCATATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548281] SGN-U564215 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349156 [Download][View] Facility Assigned ID: TUS59M04_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0014 Quality Trim Threshold: 14.5