EST details — SGN-E548297

Search information 
Request: 548297Match: SGN-E548297
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190247Clone name: TUS-59-O13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78947 [cLES-7-E5] Trace: SGN-T98846 EST: SGN-E288090 Direction: 5' Facility: TIGR
Clone: SGN-C190247 [TUS-59-O13] Trace: SGN-T340782 EST: SGN-E539907 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E548297Length: 841 bp (893 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548297 [] (trimmed) AATATTTGAAGTTTCATTTAGTCTTTCAATAGATAAACATATGTAAATTCGTGCGCATATAAAGCTAGTATGCTGAATAAACTTTGTGAGTGTTA
ATTCCCACCTTCTCCTTAAGAGCTTCCATTTCAGGTTCCTCCTCTTCAATTGCTGGCTTTTCATCTTTCTCTTCAACAACTAGCTCTTCAGATGT
ATCTTCAACCGTTGGTTCTTCAGGTTTCTCTTCAAGTGCTAGTTCAGGTGTTTCTATAGCTGCCGGTTCCTGAGGTTTTTCTTCAGTCGCAGGTT
CTTGAGGTTTCTCCTCAGCTGGTACTTCAGATTTCTCCTCAAATGTTGGTTCTTGAGGTTTCTCCTCAACTGCTGGTACATCAGGTTTCTCTTCA
ATGACTAGTTCTTCATTTTTTATTTCAACTGCCGATTCTTCAGGATTTTCCTCAATGTCTGGGGAGTGAGCATCATCATTATTGGTATTGCATGG
AATTTCACTGCCAGTTTTGGTGTTTGAGTCCACAATTAGCATATTCTTTTCCAAAAGAGTTACCTTTTCAGGTTTCTCCTCTTTCATTGCTGGTT
CTTTATGTATCTCTTCTAACGCTAGTTCCTTGGGTGTTTCTTCAGTTACTTGTTTTTCAGGTTTCTCCTCAATTTTTGGTTCTTTGATCGTCTCC
TCAACTGATGGTTCTTCAAACTTTTCTCCCACGGTTGATGTTTCAAGTTTCTCTTCGATTGTCGGTTTTTCAAGTATTTTCTCAACCGATGGTTC
TTCTGGTTTCTCAAAACCCTTGATTCTTCAGATTTCTCTTTCATAGATGATTCTTCAGATATCTCTTCAACTTCTGCCTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548297] SGN-U563192 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349172 [Download][View] Facility Assigned ID: TUS59O13_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.913 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5