EST details — SGN-E548330

Search information 
Request: 548330Match: SGN-E548330
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190362Clone name: TUS-60-D8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74648 [cLES-11-A20] Trace: SGN-T99868 EST: SGN-E286337 Direction: 5' Facility: TIGR
Clone: SGN-C190362 [TUS-60-D8] Trace: SGN-T340977 EST: SGN-E540102 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548330Length: 537 bp (882 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E548330 [] (trimmed) GAAAAATCCCAAAATCGAACAAACGAAAGTCAATTTGGCAATGGAGGTTCCAGGTTCATCGAAGAAGATGATTGCAACACAAGAAGAAATGGTGG
AGAACAAAGTGCCATTAGCATATAGGGATCAGTGCGCACACCTTTTGATCCCTTTGAACAAGTGTCGGCAATCGGAATTTTATCTTCCATGGAAG
TGCGAGGATGAGCGCCATACATATGAGAAGTGTGCGTATGAGCTTGTTATGGAACGGATGCTTCAGATGCAGAAGATCCGTGAAGAGGAAGCACG
AATGAAGCAAAAGGGACATCAATCCATTCCTCTCATTCCTAAGACTGCTAATGCCTAGTTTTTTTTCCCATCATCTAGGGAGATGAAAAAATTGC
CAATGTCTCCAGAAACCAAGAGAATTATCAAATACTAGTTGGTGGATTTGTATTTGAAGTTGATTTCTGTTGAGTGATAAAGATGGTGTGGACTA
TTTGTAACCTCTACCTGAATGCAAATAATGTTTTCTCATCAACAGTTTTTATGCTATTCTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548330] SGN-U568717 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349205 [Download][View] Facility Assigned ID: TUS60D08_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5