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EST details — SGN-E548414

Search information 
Request: 548414Match: SGN-E548414
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190659Clone name: TUS-60-P17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C87358 [cLET-4-D21] Trace: SGN-T103286 EST: SGN-E289615 Direction: 5' Facility: TIGR
Clone: SGN-C190659 [TUS-60-P17] Trace: SGN-T341487 EST: SGN-E540612 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E548414Length: 790 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E548414 [] (trimmed) GTATTGTAAAGGTCATCCAGATAATAGTCGTTTAATTGAAATTGATGAAAATGAGAGTGGGGAGGTTGTGCTTCCTGGTGGAATTTCAATACCTA
ATGTGTCAAAATCTATCAAATGTGATAAAGGAGAACACACACGGTTTGGCTCTGATGTTCTTTCTTTCCAGCAGATGTCAGAGCAGTTCAATCAG
GAAGTATCCGTGAATGGTAAAATTCCTTCGGGGCTCTTCAATACTATGTTCGAGTTTTCTGGTTCTTGGCAGAAGGATGCTGCATACACTAAAAC
CCTTGCTTTTGATGGTGTGTTCATCACGTTGTACTCTGTTGCTCTAGAAAAATCTCAAATGGTGCTGTGTGATTATGTTAAAAAGGAAGTTCCAT
CAACATGGGATCCTGCAGCATTAGCAAGGTTTATTGAAAAATTTGGTACTCATGTCATTGTTGGTATAAAGATGGGGGGAAAAGATGTAATATAT
ATGAAACAACAGCACTCCTCATCGCTTCTGCCCGCTGACGTGCAAAAACGTTTGAAGACAATGGCAGATAAGAGGTTTTCAGGTGCAAATGAACA
AGGGGGAGTAGAATCGCAGCAGACACATCAGAATGAGAAGTTTGAAATCAGGGAGCACCGACTGAGGTTTGCCGATCCCAATATATCAGGTTCAT
ATGCACATAAGGAGGATACTGTTTGTATTTGCAAGAAGAGAGGTGGAAGTGATAGCAGAGGCCTGATGCATAATCAGTGGGTACAAAGTGTTGAT
CAGGAGCCTGATGTGATCTCAATGTCCTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548414] SGN-U585158 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349289 [Download][View] Facility Assigned ID: TUS60P17_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0065 Quality Trim Threshold: 14.5